Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 seq6 84.2 3e-11 >seq3 Length=136109863 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||| || || || || ||| | || || ||| || Sbjct 25369339 ATGCAGATTTTTGTCAAGACTTTGACAGGGAAGACCATAACACTGGAGGTGGAATCCTCA 25369280 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || |||||| ||| || || || ||||| ||||| || ||||| ||| Sbjct 25369279 GATACCATTGACAATGTGAAAGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGATCAA 25369220 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | |||||||||||||| |||||| || || | ||||||| ||| Sbjct 25369219 CAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACGCTTGCAGATTACAAT 25369160 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 || || ||| | || | ||||| ||||| Sbjct 25369159 ATTCAGAAGGAGTCCACTTTACATTTGGTGTT 25369128 Score = 86.0 bits (94), Expect = 9e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| ||||| || || || || || | || || ||| ||| Sbjct 25369795 ATGCAAATCTTCGTGAAAACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAAAGTTCC 25369736 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || ||||| || ||||||||||| || ||||| || || Sbjct 25369735 GATACAATTGATAATGTCAAGGCCAAAATTCAGGATAAAGAAGGAATCCCTCCTGACCAG 25369676 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| | |||| ||||| || || || |||||| ||||| | | ||||| || Sbjct 25369675 CAAAGGCTTATTTTCGCCGGAAAACAACTTGAAGATGGTAGAACCCTTGCCGATTACAAC 25369616 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || || | || || || || ||| | | |||||||| || Sbjct 25369615 ATTCAGAAGGAATCCACACTCCACTTGGTGCTTCGTTTAAGAGGTGG 25369569 >seq6 Length=137147148 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 || ||||| ||||| ||| | |||||||||| || || || ||||| || ||| Sbjct 120287568 AAGCACGCGAAATCGCAGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTT 120287627 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 || || ||||||| || | ||||| |||||||||||||| ||| || | || ||| Sbjct 120287628 AAACCTGGCATTAACCCGCGCTTTTTCAGCCAAAATATCGAGCAGAAGCTCCCGGAGAAG 120287687 Query 18275 AATATACCCTCAACGCACGCGAACGC 18300 || || || || || || |||||||| Sbjct 120287688 AAGATCCCTTCGACACAGGCGAACGC 120287713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731866986676800