Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6 224 1e-52 seq1 100 3e-15 >seq6 Length=137147148 Score = 224 bits (248), Expect = 1e-52 Identities = 213/272 (78%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||| ||||||||||||||||| ||||| | |||| | || || Sbjct 120287871 GAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGAGACCTGA 120287930 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 |||||||||||||||| ||||| || ||||| |||||||| ||| |||||||| Sbjct 120287931 ACCTCCTTCATGAACCTTCCGGCGAGATTCTCCAGGACGATGCCATCGGATGCGGCGAAG 120287990 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || |||||||| ||||||||||||||||| ||||| |||| || |||||||| | Sbjct 120287991 AAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGAGATTCCCAGTGGCGG 120288050 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 |||| || ||||| || ||||| || ||||||| ||| ||||| || || |||||| Sbjct 120288051 AGGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCTCCGCTTTCTTGTAC 120288110 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 || ||||||| | |||| |||| ||||| Sbjct 120288111 ATTTCCCATATCTCAGGGTATTGGATTGGGAA 120288142 Score = 100 bits (110), Expect = 3e-15 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| |||||| || || ||| || || ||||||||||| |||| ||||| || Sbjct 120287277 GCCTTCTGGTACTCCCCAACACGCTTTTCAAAGAAGTTGGTCTTCCCCTGAAGCGAAATA 120287336 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | |||||||| || ||||| | ||||| ||| | ||| || |||| | | Sbjct 120287337 AGTTCCATCCAATCAAAAGGGTTCTGAACATTGTACACCTTCTTGCACCCAAGCGCCACC 120287396 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 |||| || || || || ||||| || ||||| | ||| ||| | ||||||| || | Sbjct 120287397 AGCAACCGATCTGCAACGAACTCAATATACTGACTCATCAGGTCTCCGTTCATTCCTACC 120287456 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 | ||| ||| |||| |||| ||||||||| |||| || || ||||| || Sbjct 120287457 AACGCGCACGGAAGCGCGTCGCACACAAACTCCCTCTCTATATCCACGGCGTC 120287509 >seq1 Length=137414913 Score = 100 bits (110), Expect = 3e-15 Identities = 111/146 (76%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 1592153 GTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAG--C 1592210 ||||| ||| |||| ||||| || | || || || || |||||| | |||||||| | Sbjct 77822 GTCGATCAGGCCACGCTCTTCGATCTCATTCTGGCTGCAAACTACTTGAACATCAAGAGC 77881 Query 1592211 CTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGG 1592270 |||| | || ||| ||| || | ||||| ||||||||||||||||| | || |||| Sbjct 77882 CTCT--TGGACCTTACTTGCCAGACAGTGGCAGACATGATCAAGGGCAAGACTCCGGAGG 77939 Query 1592271 AGATCCGCAAGACCTTTAACATCAAG 1592296 |||| |||||||| || || |||||| Sbjct 77940 AGATTCGCAAGACATTCAATATCAAG 77965 Score = 86.0 bits (94), Expect = 8e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| ||| | || ||| ||| || | ||||| || Sbjct 1619336 GCTGCAAACTACTTGAACATCAAGAGCCTGTTGGACCTTACTTGCCAGACAGTGGCAGAC 1619395 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||| | || |||||||| |||||||| || || |||||| ||| Sbjct 1619396 ATGATCAAGGGCAAGACTCCGGAGGAGATTCGCAAGACATTCAATATCAAGAACG 1619450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107094228553716