Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6 170 3e-36 seq1 87.8 3e-11 >seq6 Length=137147148 Score = 170 bits (188), Expect = 3e-36 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || || |||||||||||||| | ||||| || ||||| |||||||| Sbjct 120287916 GCCTCGGAGACCTGAACCTCCTTCATGAACCTTCCGGCGAGATTCTCCAGGACGATGCCA 120287975 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| |||||||| ||||| |||||||| |||||||||| |||||| ||||| |||| Sbjct 120287976 TCGGATGCGGCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGA 120288035 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 || |||||||| |||| || ||||| || ||||| || ||||| || || ||| Sbjct 120288036 GATTCCCAGTGGCGGAGGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCC 120288095 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 || || || |||||||| ||||||||| |||| |||| ||||||| Sbjct 120288096 TCCGCTTTCTTGTACATTTCCCATATCTCAGGGTATTGGATTGGGAACA 120288144 Score = 134 bits (148), Expect = 2e-25 Identities = 221/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 794347 TCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGC 794406 |||||| |||||| ||||| ||| | || ||||| | |||||||| || ||| Sbjct 120287600 TCGCGA--GATCAACTCGTTCGAGAAGGTTAAACCTGGCATTAACCCGCGCTTTTTCAGC 120287657 Query 794407 CAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACG 794466 ||||| || | ||||| || || ||||| ||||| || ||||| ||| || ||||| Sbjct 120287658 CAAAATATCGAGCAGAAGCTCCCGGAGAAGAAGATCCCTTCGACACAGGCGAACGCGACG 120287717 Query 794467 AGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCC 794526 | || || || || | || ||| || |||||| | |||||||| || Sbjct 120287718 ATGCGTTCCGCGAACGATTCTGAGCCATC------GATCCATCGTAGGGCCCACTCGGCT 120287771 Query 794527 TTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGG 794586 || ||| | || | || || || || || ||| | ||||| | | |||||| | | Sbjct 120287772 TTCTTCTTTACGCAAGGAACGGTCTCAATTGCGTGGAAGAGACGATTCTTCTCTGATGAG 120287831 Query 794587 TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCG 794646 || |||| ||| || |||| ||||| ||| |||||||||||||||| ||||| ||| Sbjct 120287832 TCTTTGATGTAAGTTTCGAGAAGGAGGCTGTACATCTCTGAGTGGATGTTCTCGATTGCG 120287891 Query 794647 ATCTGGAAGCCATAAAAG 794664 ||||||||||| || ||| Sbjct 120287892 ATCTGGAAGCCGTAGAAG 120287909 Score = 95.1 bits (104), Expect = 2e-13 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 ||||| || || ||| || || ||||||||||| |||| ||||| || | |||||| Sbjct 120287286 TACTCCCCAACACGCTTTTCAAAGAAGTTGGTCTTCCCCTGAAGCGAAATAAGTTCCATC 120287345 Query 793968 CACGGGAACGGGT--TGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025 || || |||| || | | ||| ||||| |||||| |||| | | |||| | Sbjct 120287346 CAATCAAAAGGGTTCTGAACAT--TGTACACCTTCTTGCACCCAAGCGCCACCAGCAACC 120287403 Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-C 794084 | || || ||||| ||||| ||||| | ||| ||| | ||||||| || | | ||| | Sbjct 120287404 GATCTGCAACGAACTCAATATACTGACTCATCAGGTCTCCGTTCATTCCTACCAACGCGC 120287463 Query 794085 ACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 || || |||| |||| |||||||| |||| || || ||||| || Sbjct 120287464 AC-GGAAGCGCGTCGCACACAAACTCCCTCTCTATATCCACGGCGTC 120287509 >seq1 Length=137414913 Score = 87.8 bits (96), Expect = 3e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 ||||||| || |||| ||||| || | || || || || |||||| | |||||||| Sbjct 77820 AGGTCGATCAGGCCACGCTCTTCGATCTCATTCTGGCTGCAAACTACTTGAACATCAAGA 77879 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| | || | ||| |||| ||||| || | |||||||||||| | || |||| Sbjct 77880 GCCTCTTGGACCTTACTTGCCAGACAGTGGCAGACATGATCAAGGGCAAGACTCCGGAGG 77939 Query 2035732 ACATCCGCAAGACCTTTAACATCAAG 2035757 | || |||||||| || || |||||| Sbjct 77940 AGATTCGCAAGACATTCAATATCAAG 77965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916188106740572