Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 8e-16 seq4 86.0 5e-12 >seq3 Length=136109863 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| || |||| || || || || ||| | || ||| || Sbjct 25369111 ATGCAAATCTTTGTCAAGACACTAACCGGAAAGACAATAACCCTGGAGGTCGAGTCTTCA 25369052 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || ||| ||| || || ||||| || | || || ||| Sbjct 25369051 GACACCATTGACAATGTCAAAGCAAAAATCCAAGACAAAGAGGGTATCCCACCTGACCAG 25368992 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||| | ||| ||||| ||| ||||||| | | || | || || |||||| Sbjct 25368991 CAGAGACTTATCTTTGCTGGTAAGCAGTTGGAGGATGGAAGGACCCTTGCTGATTACAAC 25368932 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||| |||||||| || ||||| | || ||| || | ||||| |||| Sbjct 25368931 ATTCAGAAGGAGTCCACCTTGCATCTTGTTTTGCGACTCCGAGGTGGAA 25368883 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||||||||| ||||| ||||| || ||||| || | || ||| | Sbjct 25369339 ATGCAGATTTTTGTCAAGACTTTGACAGGGAAGACCATAACACTGGAGGTGGAATCCTCA 25369280 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || ||| |||||| || ||||| ||| | || ||||| Sbjct 25369279 GATACCATTGACAATGTGAAAGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGATCAA 25369220 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | || ||||| ||||| || || | | || | || || ||||| Sbjct 25369219 CAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACGCTTGCAGATTACAAT 25369160 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 ||||| |||||||| || || || |||||||| Sbjct 25369159 ATTCAGAAGGAGTCCACTTTACATTTGGTGTTG 25369127 >seq4 Length=133615181 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| || || || ||||| |||| || || ||||| ||| | || |||| || Sbjct 130208552 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTGGAGGTGGAGTCT 130208493 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| || ||| | | || || |||||| || || |||||| | || ||| Sbjct 130208492 TCCGACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCGGAC 130208433 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||| | || || | || || || ||||||||||||| | || | || |||||| Sbjct 130208432 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTAC 130208373 Query 107733 AACATTCAAAAGGAGTCTAC 107752 ||||| || |||||||| || Sbjct 130208372 AACATCCAGAAGGAGTCCAC 130208353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874136001572