Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25]
548 sequences; 1,353,504,219 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 5e-15
seq6 86.0 1e-11
>seq3
Length=136109863
Score = 96.9 bits (106), Expect = 5e-15
Identities = 152/215 (71%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
|||| || || | || || || ||||| || || || || | || || ||| | | |
Sbjct 25369338 TGCAGATTTTTGTCAAGACTTTGACAGGGAAGACCATAACACTGGAGGTGGAATCCTCA- 25369280
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
||||| ||| | ||||| ||| ||| || || ||||| ||||||||||| ||||||
Sbjct 25369279 GATACCATTGACAATGTGAAAGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGATCAA 25369220
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| || ||||| || || ||||| || | || ||| || ||| | ||||||| |||
Sbjct 25369219 CAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACGCTTGCAGATTACAAT 25369160
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
|| || || || || ||| | ||||| || || ||
Sbjct 25369159 ATTCAGAAGGAGTCCACTTTACATTTGGTGTTGCG 25369125
>seq6
Length=137147148
Score = 86.0 bits (94), Expect = 1e-11
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | ||||| |||| ||||| || || ||| | || || ||| ||
Sbjct 34075701 TGCAGATTTTCGTCAAAACCCTAACCGGAAAGACGATCACTCTGGAGGTTGAATCCTCCG 34075642
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || | || || || || || ||| |||||||||||||| |||||||| |
Sbjct 34075641 ACACAATCGACAACGTGAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCCGATCAGC 34075582
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||||||| || ||||| ||||| |||| ||| | | || | | ||||| || |
Sbjct 34075581 AGCGACTCATCTTCGCAGGGAAACAGCTAGAGGATGGTCGCACCCTCGCCGATTACAACA 34075522
Query 146212 TACAAAAAGAATCGACTATCCA 146233
| ||||| || || || ||||
Sbjct 34075521 TTCAAAAGGAGTCCACGCTCCA 34075500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786161014760160
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |