Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq5 114 8e-21 seq3 107 1e-18 seq6 100 2e-16 seq4 100 2e-16 >seq5 Length=149900536 Score = 114 bits (126), Expect = 8e-21 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || ||||||||||||| ||||||||| |||| || | || |||||||| || Sbjct 23663900 TCTTTCTGGATGTTGTAATCGGCGAGTGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 23663841 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | |||||||| || |||| | ||||||||||| || || ||| || | Sbjct 23663840 ATGAGGCGCTGCTGGTCCGGCGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTC-ACGTT 23663782 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||||||| |||||||| |||| ||||| || || || |||| ||||| || Sbjct 23663781 GTCGATGGTGTCGGAAGATTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTCAC 23663722 Query 33738 AAAGATCTGCAT 33749 || |||||||| Sbjct 23663721 GAAAATCTGCAT 23663710 >seq3 Length=136109863 Score = 107 bits (118), Expect = 1e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || |||||||||||||| | ||||| || || || ||| || || ||| Sbjct 25369329 AAAATCTGCATGCCACCTCTCAAACGGAGAACCAAGTGAAGCGTTGACTCCTTCTGAATG 25369388 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | ||||| | | | || || | || || || ||||||||||| | |||| Sbjct 25369389 TTGTAATCTGCTAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATCAACCTCTGC 25369448 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||| |||||||| ||||| | || |||| ||| | |||||| Sbjct 25369449 TGGTCAGGTGGGATACCCTCTTTGTCTTGGATTTT-AGCTTTGACATTGTCAATGGTGTC 25369507 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| || || | ||||| ||||| || || || || || || || || ||||| Sbjct 25369508 TGAGGATTCGACCTCTAAGGTGATGGTTTTCCCAGTCAAGGTCTTCACGAAAATTTGCAT 25369567 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || ||||||||||||| |||| ||| || || || |||||||| | || || | | | Sbjct 25369125 CGCAACACCAAATGTAAAGTGGACTCCTTCTGAATATTGTAATCTGCAAGCGTCCTTCCA 25369184 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || || ||||| || || | | ||| |||||| | || | || |||||| Sbjct 25369185 TCTTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGGAATGCCCTCTTTG 25369244 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||| || |||| |||| ||| | ||| || |||||||| || | || || Sbjct 25369245 TCCTGAATCTTAGCTTTC-ACATTGTCAATGGTATCTGAGGATTCCACCTCCAGTGTTAT 25369303 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || ||||| || || || ||||| |||||||| Sbjct 25369304 GGTCTTCCCTGTCAAAGTCTTGACAAAAATCTGCAT 25369339 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| ||||| | |||||| || || ||| || || || ||||||||||||| Sbjct 25369569 CCACCTCTTAAACGAAGCACCAAGTGGAGTGTGGATTCCTTCTGAATGTTGTAATCGGCA 25369628 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | |||||||||||| ||||| | | ||||| || | || Sbjct 25369629 AGGGTTCTACCATCTTCAAGTTGTTTTCCGGCGAAAATAAGCCTTTGCTGGTCAGGAGGG 25369688 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || |||||| | | |||| || | || ||| |||||| Sbjct 25369689 ATTCCTTCTTTATCCTGAATTTT-GGCCTTGACATTATCAATTGTATCGGAACTTTCCAC 25369747 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || || ||||| || ||||| ||||| Sbjct 25369748 CTCAAGGGTGATGGTCTTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 25369795 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||| | || || ||| || || || ||||||||||||| Sbjct 125683917 CCACCACGAAGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCT 125683976 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| || | |||||||||||||| ||||| | |||||| || | || Sbjct 125683977 AAGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGGGGA 125684036 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCA 33700 | || || || || ||| || |||| |||| ||| | |||||| | | | || | Sbjct 125684037 ATTCCCTCCTTATCCTGAATCTTGGCTTTC-ACATTGTCAATGGTGTC-CGAGCTCTCAA 125684094 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| || || ||||| || || || ||||| |||||||| Sbjct 125684095 CCTCAAGAGTGATGGTCTTTCCTGTCAAAGTCTTGACAAATATCTGCAT 125684143 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 124971764 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGC 124971705 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | ||||||||| || | || | ||||| ||||| || || Sbjct 124971704 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTG 124971645 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | | | ||| | ||||||| || ||||| || | ||||| || || || || Sbjct 124971644 GCCTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTCCCCGT 124971586 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || ||||||||||| Sbjct 124971585 TAGGGTTTTCACGAAGATCTGCAT 124971562 >seq6 Length=137147148 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| ||||| ||||||||||||| ||| ||||| | || || | ||| Sbjct 34075500 TGGAGCGTGGACTCCTTTTGAATGTTGTAATCGGCGAGGGTGCGACCATCCTCTAGCTGT 34075559 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | ||||||||||| | || | ||||||||||| ||| || Sbjct 34075560 TTCCCTGCGAAGATGAGTCGCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGAATCTTG 34075619 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| || | ||| | |||||| ||||| || || | |||||||| || || || Sbjct 34075620 GCCTTC-ACGTTGTCGATTGTGTCGGAGGATTCAACCTCCAGAGTGATCGTCTTTCCGGT 34075678 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || || |||||||| Sbjct 34075679 TAGGGTTTTGACGAAAATCTGCAT 34075702 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || || || || |||| || ||||| |||| || | || Sbjct 34075728 TGGAGCGTGGACTCCTTCTGGATATTATAGTCGGCAAGGGTGCGACCGTCTTCGAGCTGC 34075787 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | ||||||||| || |||| | ||||| ||||| || || Sbjct 34075788 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTA 34075847 Query 33667 TGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| ||| |||| ||| ||| || ||||| || | || ||||| || ||||| Sbjct 34075848 GCCTTCA-CATTGTCAATGGTATCGGAGGACTCCACCTCCAAGGTAATCGTCTTCCCTGT 34075906 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || ||||||||||| Sbjct 34075907 TAGGGTTTTCACGAAGATCTGCAT 34075930 >seq4 Length=133615181 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| ||| ||||| |||| |||| || Sbjct 130208347 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGC 130208406 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | ||||||||| || | || | ||||| ||||| ||| || Sbjct 130208407 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCTTG 130208466 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| | | ||| | ||||||| || ||||| || | ||||| || || || || Sbjct 130208467 GCCTTCA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCCAGGGTGATGGTCTTCCCCGT 130208525 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || ||||||||||| Sbjct 130208526 TAGGGTTTTCACGAAGATCTGCAT 130208549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701804668160