Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 seq3 93.3 4e-14 seq8 87.8 2e-12 >seq6 Length=137147148 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | ||||| |||||||||||||| ||| || || || || || Sbjct 34075037 AACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCCAGAGTGCGTCCGTCCTC 34075096 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || || | | ||||||||||||| || || || || || || ||||| || Sbjct 34075097 AAGCTGCTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTGGAATCCCCTCTTTGTCCTG 34075156 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || ||| |||| | || | |||||| | |||||| || | ||| | ||| || Sbjct 34075157 TATCTTTGCCTTCACGTTATCAATAGTATCAGAACTCTCCACCTCTAACGTTATCGTCTT 34075216 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| || | |||||||||||| Sbjct 34075217 CCCGGTTAGAGTCTTCACGAAAATCTGCAT 34075246 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| |||||||||||||| ||| | ||| || ||| || |||||||| || | Sbjct 34075509 GACTCCTTTTGAATGTTGTAATCGGCGAGGGTGCGACCATCCTCTAGCTGTTTCCCTGCG 34075568 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| ||||| ||||| ||||||||||| || ||| || |||| Sbjct 34075569 AAGATGAGTCGCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGAATCTTGGCCTTCACG 34075628 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | || || || | || | ||| || || || || ||||| Sbjct 34075629 TTGTCGATTGTGTCGGAGGATTCAACCTCCAGAGTGATCGTCTTTCCGGTTAGGGTTTTG 34075688 Query 132110 ATGAAAATCTGCATG 132124 | ||||||||||||| Sbjct 34075689 ACGAAAATCTGCATG 34075703 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || || || |||||| | ||| || ||||||||||| || |||| Sbjct 34075737 GACTCCTTCTGGATATTATAGTCGGCAAGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCG 34075796 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || || || |||||||| || || || || |||| Sbjct 34075797 AAGATGAGACGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTAGCCTTCACA 34075856 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||||| | |||||| || | || | ||| || || || || ||||| Sbjct 34075857 TTGTCAATGGTATCGGAGGACTCCACCTCCAAGGTAATCGTCTTCCCTGTTAGGGTTTTC 34075916 Query 132110 ATGAAAATCTGCATGA 132125 | ||| |||||||||| Sbjct 34075917 ACGAAGATCTGCATGA 34075932 >seq3 Length=136109863 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||||||||| | ||||| || ||||| ||||| || | || | | Sbjct 25369125 CGCAACACCAAATGTAAAGTGGACTCCTTCTGAATATTGTAATCTGCAAGCGTCCTTCCA 25369184 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| ||||||| |||| || | |||||||||||| || ||||| ||||| Sbjct 25369185 TCTTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGGAATGCCCTCTTTG 25369244 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||||| | || | ||||| | | ||||| || | || | Sbjct 25369245 TCCTGAATCTTAGCTTTCACATTGTCAATGGTATCTGAGGATTCCACCTCCAGTGTTATG 25369304 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || |||| ||| || | |||||||||||| Sbjct 25369305 GTCTTCCCTGTCAAAGTCTTGACAAAAATCTGCATG 25369340 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || |||||||||||| | |||||| ||| || |||||||| |||| Sbjct 125684632 TTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCATCCTCCAGCTGTTTTCCGG 125684691 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 ||||||||||||| || || ||||| || ||||| ||||| |||||| Sbjct 125684692 CGAAGATTAGACGCTGCTGGTCGGGAGGGATCCCTTCCTTATCTTGAATTTT 125684743 >seq8 Length=129606920 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 || ||| | ||| | | | ||||| |||||||||||||| || || || || || Sbjct 126485803 CAGAACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGAGTGCGTCCGTC 126485862 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 || ||||| || || | | ||||||||||||| || || || || || || ||||| || Sbjct 126485863 CTCAAGCTGGTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTGGAATCCCATCTTTGTC 126485922 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 || ||| |||| | || | |||||| | |||||| || | ||| | ||| Sbjct 126485923 CTGTATCTTTGCCTTCACGTTATCAATAGTATCAGAACTCTCCACCTCTAGCGTTATCGT 126485982 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| || | |||||||| ||| Sbjct 126485983 CTTCCCGGTTAGAGTCTTCACGAAAATCTACAT 126486015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607935213280