Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq6 100 3e-16 seq3 82.4 7e-11 >seq6 Length=137147148 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | || || ||||| |||||||||| ||||||| | || || ||| || Sbjct 34075703 CATGCAGATTTTCGTCAAAACCCTAACCGGAAAGACGATCACTCTGGAGGTTGAATCCTC 34075644 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||| || ||||| | || || || ||| || ||||| || || || |||||||| Sbjct 34075643 CGACACAATCGACAACGTGAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCCGATCA 34075584 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| ||||||| | || || ||||| || || |||| | | | || ||||||||| Sbjct 34075583 GCAGCGACTCATCTTCGCAGGGAAACAGCTAGAGGATGGTCGCACCCTCGCCGATTACAA 34075524 Query 25354 TATTCAAAAAGAATCCAC 25371 |||||||| || ||||| Sbjct 34075523 CATTCAAAAGGAGTCCAC 34075506 >seq3 Length=136109863 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | ||||| || || || || || || | || || | || || ||| || Sbjct 25369340 CATGCAGATTTTTGTCAAGACTTTGACAGGGAAGACCATAACACTGGAGGTGGAATCCTC 25369281 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| || || | || ||| || ||| || |||||||| || || || ||||| Sbjct 25369280 AGATACCATTGACAATGTGAAAGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGATCA 25369221 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 || || ||||| | || ||| || || || ||||||| || | | |||||||| Sbjct 25369220 ACAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACGCTTGCAGATTACAA 25369161 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||||| || || ||||| | ||||| ||||| Sbjct 25369160 TATTCAGAAGGAGTCCACTTTACATTTGGTGTT 25369128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445091351103360