Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq6 134 2e-26 seq9 95.1 2e-14 seq3 93.3 6e-14 seq8 89.7 7e-13 seq2 89.7 7e-13 seq10 84.2 3e-11 >seq6 Length=137147148 Score = 134 bits (148), Expect = 2e-26 Identities = 403/612 (66%), Gaps = 10/612 (2%) Strand=Plus/Plus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| ||||| || || || ||||| ||||||| || || ||||| || || || Sbjct 120287568 AAGCACGCGAAATCGCAGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTT 120287627 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAA 39732 | || ||||||| || |||||||| ||||||||||| | |||| ||| | || || || Sbjct 120287628 AAACCTGGCATTAACCCGCGCTTTTTCAGCCAAAATATCG-AGCAGAAGCTCCCGGAGAA 120287686 Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA-TTAT 39791 |||||| ||||| || || || || || | | || || ||| | | | || Sbjct 120287687 GAAGATCCCTTCGACACAGGCGAACGCGACGATGCGTTCCGCG-AACGATTCTGAGCCAT 120287745 Query 39792 GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | ||||| || |||||||||||||| ||||| | || || || || | Sbjct 120287746 CGATCCATCGTAGGGCCCACTCGGCTTTCTTCTTTACGCAAGGAACGGTCTCAATTGCGT 120287805 Query 39852 TAAAGAGATAATGTTTTTCATCACTA-TCTTTAACATATGTATCTATTAACAGACTATAC 39910 |||||| || || || | | | ||||| | || || || | | || || ||| Sbjct 120287806 GGAAGAGACGATTCTTCTC-TGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGGCTGTAC 120287864 Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970 || ||||| |||||||| || || || ||||| || ||||| || | ||| || | Sbjct 120287865 ATCTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGAG 120287924 Query 39971 ATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCG 40030 | || ||||| || ||| | || | ||| || || || ||||| ||| Sbjct 120287925 ACCTGAACCTCCTTCATGAACCTTCCGGCGAGATTCTCCAGGACGATGCCATCGGATGCG 120287984 Query 40031 GCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTGTCAATTTATTCC 40088 || || || || | || || | ||||| | || || |||| | | | || Sbjct 120287985 GCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGAGAT--TCCC 120288042 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 ||| || || || | || ||||| || |||||||| ||||| ||||| || | Sbjct 120288043 AGTGGCGGAGGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCTCCGCTT 120288102 Query 40149 TTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGAT 40208 | |||||||| | |||||| ||| | ||||| ||||| || || ||||| | || | Sbjct 120288103 TCTTGTACATTTCCCATATCTCAGGGTATTGGATTGGGAACATGCAGAATCTGTCAGGGT 120288162 Query 40209 TTTTTGCAAGGA 40220 || ||||||| Sbjct 120288163 TTGGAGCAAGGA 120288174 Score = 86.0 bits (94), Expect = 9e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863 ||||||||| ||| | |||||||||||| || || || || | || | ||||| Sbjct 67164552 AATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGTA 67164493 Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923 || ||| | ||| ||||| ||||| ||| || | |||||| ||||| || || Sbjct 67164492 AACAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 67164433 Query 69924 ATATATACCCTCTATGCTATCATCTATCAT 69953 |||||| |||||||| ||||||||| |||| Sbjct 67164432 ATATATTCCCTCTATACTATCATCTTTCAT 67164403 >seq9 Length=147089397 Score = 95.1 bits (104), Expect = 2e-14 Identities = 119/162 (73%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863 ||||||||| ||| | |||||||||||| || || || || | || | ||||| Sbjct 92823064 AATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGTG 92823123 Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923 |||||| | ||| ||||| ||||| ||| || | |||||| ||||| || || Sbjct 92823124 AATAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 92823183 Query 69924 ATATATACCCTCTATGCTATCATCTATCATGT-TAAGAAGAA 69964 |||||| |||||||| ||||||||| |||| | || |||||| Sbjct 92823184 ATATATTCCCTCTATACTATCATCTTTCATATATATGAAGAA 92823225 >seq3 Length=136109863 Score = 93.3 bits (102), Expect = 6e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 ||||| ||||| || | ||| || || || |||||||||||| ||| ||| | || | | Sbjct 115211007 GTTCCAGCATTGAAAAGTGTTGGGGAAGCATGAGTGAACCATCTTTGAGACATCATGTGG 115210948 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 || ||| | ||| |||||||| || || |||||||| | || || | ||||||| Sbjct 115210947 TAAGTTCTGACAGCGGATTCTATGTCATCCTTGTGAATTCCAACAGCAACCCTCATCAAC 115210888 Query 70111 ATATGCTGAGGTCGTTCTAC--CGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 || ||||| || | ||| || | ||| | | | ||||| ||||| || | |||| Sbjct 115210887 ATGTGCTGGGGCCTTTCCACAACCTTTCCT--TGAACCTTCAAGAGGTAGGACCTCTCCA 115210830 Query 70169 GAGTTTTAAACCCAAAATA 70187 | ||||| || ||||| || Sbjct 115210829 GGGTTTTGAAACCAAAGTA 115210811 >seq8 Length=129606920 Score = 89.7 bits (98), Expect = 7e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863 ||||||||||||| | |||||||||||| || || || || | || | |||||| Sbjct 38741328 AATACCATTAGATGTCCCATTTGTTCCACGTATGTAGCTGCCAATGGCACAAATATTGTG 38741387 Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923 || ||| | ||| ||| | ||||| ||| || | |||||| ||||| || || Sbjct 38741388 AACAGAAACACCAATTTCCCCTGCTGATTTGCCAATGACAGCACACTCCTTCAAAGTATC 38741447 Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTG 69980 |||||| | |||||| ||||||||| |||| | | ||| || || ||| || ||| Sbjct 38741448 ATATATTCACTCTATACTATCATCTTTCATATATATAAGGAAGCAACTACTCAATTG 38741504 >seq2 Length=108997779 Score = 89.7 bits (98), Expect = 7e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863 ||||||||||||| | |||||||||||| || || || || | || | |||||| Sbjct 62922188 AATACCATTAGATGTCCCATTTGTTCCACGTATGTAGCTGCCAATGGCACAAATATTGTG 62922129 Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923 || ||| | ||| ||| | ||||| ||| || | |||||| ||||| || || Sbjct 62922128 AACAGAAACACCAATTTCCCCTGCTGATTTGCCAATGACAGCACACTCCTTCAAAGTATC 62922069 Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTG 69980 |||||| | |||||| ||||||||| |||| | | ||| || || ||| || ||| Sbjct 62922068 ATATATTCACTCTATACTATCATCTTTCATATATATAAGGAAGCAACTACTCAATTG 62922012 >seq10 Length=136175642 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 69803 TAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTAC 69862 |||||||||| ||| | |||||||||||| || || || || | || | ||||| Sbjct 96114342 TAATACCATTGGATGTCCCATTTGTTCCACGTATGTAGCTGCCAGTGGCACAGATATTGT 96114283 Query 69863 TAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGT 69922 || | | | ||| ||||| ||||| ||| || | |||||| ||||| || | Sbjct 96114282 GAACAAAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTAT 96114223 Query 69923 CATATATACCCTCTATGCTATCATCTATCAT 69953 ||||||| |||||||| ||||||||| |||| Sbjct 96114222 CATATATTCCCTCTATACTATCATCTTTCAT 96114192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904094674720