Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq6 147 2e-30 >seq6 Length=137147148 Score = 147 bits (162), Expect = 2e-30 Identities = 573/878 (65%), Gaps = 27/878 (3%) Strand=Plus/Minus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||| ||||| ||||| | ||| |||||| |||||||||| ||||| |||| || || | Sbjct 120288144 TGTTCCCAATCCAATACCCTGAGATATGGGAAATGTACAAGAAAGCGGAGGCATCGTTCT 120288085 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCAT-TAAAACC- 43824 ||||||| || |||||||| | | ||| | || ||| | || | ||| Sbjct 120288084 GGACAGCGGAGGAAGTTGACCTTTCCGGCGACCTCCGCCACTGG---GAATCTCTCACCG 120288028 Query 43825 ACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAG 43883 || || || ||||| || || | || || || || || ||| || || | Sbjct 120288027 ACGGCGAGCGCCACTTTATCACTCACGTCCTTGCCTTCTTCGCCGCATCCGATGGCATCG 120287968 Query 43884 TCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTT 43943 || || ||| | | | |||| | | || ||||| | | || ||||| | Sbjct 120287967 TCCTGGAGAATCTCGCCGGAAGGTTCATGAAGGAGGTTCAGGTCTCCGAGGCACGCGCCT 120287908 Query 43944 TTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAG 44003 | || || || || || || || || || || || || || |||||||| || || | | Sbjct 120287907 TCTACGGCTTCCAGATCGCAATCGAGAACATCCACTCAGAGATGTACAGCCTCCTTCTCG 120287848 Query 44004 ATACGTACATCAAAGA-TGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTA 44062 | || ||||||||||| | || |||||| |||| | || | || || || || || Sbjct 120287847 AAACTTACATCAAAGACTCATCA-GAGAAGAATCGTCTCTTCCACGCAATTGAGACCGTT 120287789 Query 44063 CC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT---TCAAATGATTC 44118 || |||| | || | ||||| || |||||||| |||||| || ||| || || Sbjct 120287788 CCTTGCG-TAAAGAAGAAAGCCGAGTGGGCCCTACGATGGATCGATGGCTCA---GAATC 120287733 Query 44119 TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT-TTCAGGATCGT 44177 || | ||||| | |||||||| || ||| ||||| || ||||| | | ||| | | Sbjct 120287732 GTTCGCGGAACGCATCGTCGCGTTCGCCTGTGTCGAAGGGATCTTCTTCTCCGGGAGCTT 120287673 Query 44178 TTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATG 44237 ||| | ||||||||| | || || || || || ||||| || || || || || || | Sbjct 120287672 CTGC-TCGATATTTTGGCTGAAAAAGCGCGGGTTAATGCCAGGTTTAACCTTCTCGAACG 120287614 Query 44238 AGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATC 44297 |||| || || ||||||||| | || |||||||| || |||||| || | || Sbjct 120287613 AGTTGATCTCGCGAGATGAAGGCCTTCACTGCGATTTCGCGTGCTTG---CTGTACTCTC 120287557 Query 44298 -TAGGAGACGATAAGCCTTCATG-TAAGACAATTACAGATATTGTTGTAGAGGCAGTAAA 44355 | |||| | ||| || | || || | | | || || || || || | Sbjct 120287556 TTCTGAGA-AAGAAG-CTGCCTGAGGAGCGTGTGAAGGGGATCGTGAAGGACGCCGTGGA 120287499 Query 44356 GATAGAACAAGAATTTATG-ACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAAC 44414 ||||| || ||| || | || || | || || |||||||||| | | Sbjct 120287498 TATAGAGAGGGAGTTTGTGTGCGAC-GCGCTTCCGTGCGCGTTGGTAGGAATGAACGGAG 120287440 Query 44415 TTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCG 44474 |||||| || |||||||| | | |||||||||| || || ||| || || ||| Sbjct 120287439 ACCTGATGAGTCAGTATATTGAGTTCGTTGCAGATCGGTTGCTGGTGGCGCTTGGGTGCA 120287380 Query 44475 ATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCA 44534 | || || | ||| || ||||| ||||||| |||||| ||||||| | | || | Sbjct 120287379 AGAAGGTGTACAATGTTCAGAACCCTTTTGATTGGATGGAACTTATTTCGCTTCAGGGGA 120287320 Query 44535 AAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAG 44572 | || ||||| |||||||| || ||||| || || ||| Sbjct 120287319 AGACCAACTTCTTTGAAAAGCGTGTTGGGGAGTACCAG 120287282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453345490740