Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq6 132 7e-26 seq3 98.7 1e-15 seq1 87.8 3e-12 seq9 86.0 9e-12 seq8 84.2 3e-11 seq2 84.2 3e-11 >seq6 Length=137147148 Score = 132 bits (146), Expect = 7e-26 Identities = 385/582 (66%), Gaps = 8/582 (1%) Strand=Plus/Plus Query 46627 AAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 46686 || || || ||||| || |||||||||||||||| || || ||||| || || || Sbjct 120287568 AAGCACGCGAAATCGCAGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTT 120287627 Query 46687 AGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT-CCAGAAAA 46745 | || ||||||| || |||||||| ||||||||||| | || ||| | || || || Sbjct 120287628 AAACCTGGCATTAACCCGCGCTTTTTCAGCCAAAATATCG-AGCAGAAGCTCCCGGAGAA 120287686 Query 46746 GAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCA-TTAT 46804 ||| || ||||| ||| ||||| ||||| | | || || ||| | | || Sbjct 120287687 GAAGATCCCTTCGACACAGGCGAACGCGACGATGCGTTCCGCG-AACGATTCTGAGCCAT 120287745 Query 46805 GAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCAT 46864 ||||| | | | ||||| || || || |||||||| ||||| | || || || || | Sbjct 120287746 CGATCCATCGTAGGGCCCACTCGGCTTTCTTCTTTACGCAAGGAACGGTCTCAATTGCGT 120287805 Query 46865 TAAAGAGAAAGtttttttCATCACTA-TCTTTAACATATGTATCTATTAAAAGACTATAC 46923 |||||| || || || | | | ||||| | || || || | | || || ||| Sbjct 120287806 GGAAGAGACGATTCTTCTC-TGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGGCTGTAC 120287864 Query 46924 ATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 46983 || ||||| || ||||| || || || ||||| || ||||| || | ||| || | Sbjct 120287865 ATCTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGAG 120287924 Query 46984 ATCTGTACCTCTGTACAAAATCGTTCAGAC-AAATTCTCATTCACTATTCCATCACTAGC 47042 | ||| ||||| | || | | ||| | | | |||||| || || ||||| || Sbjct 120287925 ACCTGAACCTC-CTTCATGAACCTTCCGGCGAGATTCTCCAGGACGATGCCATCGGATGC 120287983 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCA 47102 || || || || | || || | ||||| | || || || || | ||| Sbjct 120287984 GGCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGAGATTCCCA 120288043 Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162 || || || || | || ||||| || ||||||||||| || ||||| ||||| Sbjct 120288044 GTGGCGGAGGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCTCCGCTTT 120288103 Query 47163 TTTATACATATTCCATATATCACGATATTGGATCGGAAAAAT 47204 || ||||| | |||||| ||| | |||||||| || || || Sbjct 120288104 CTTGTACATTTCCCATATCTCAGGGTATTGGATTGGGAACAT 120288145 >seq3 Length=136109863 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 76493 TCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCA 76552 ||||||||||| | | || |||| |||||||| || |||||| ||| ||||||| Sbjct 115211872 TCTCTTTCATACTTATTGTACAACCTCTCAAATTCTTCACCCCAACAATCTGCCAAACCT 115211813 Query 76553 GGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAG 76612 || || || || || | ||| ||||| || |||| || ||||| || ||||||| Sbjct 115211812 GGTGCCTCGTTGGGGCAAAACAAAGACCATTCTCCATTAGACTGAACCCTTTCCATAAAG 115211753 Query 76613 AGATCAGGTATCCATAGAGCAATAAATAGATCTC 76646 |||||||| | ||| || ||| ||||||||||| Sbjct 115211752 AGATCAGGCACCCAAAGTGCATAAAATAGATCTC 115211719 Score = 96.9 bits (106), Expect = 5e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||| | ||| | ||||| | ||| | || | | ||| |||| ||| || Sbjct 115211373 CCCCCTTGATCAACATAGCGAGCAGTATCATTGAACACACGTAGCATAGGAACAATACCA 115211314 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| ||||| |||||| || || || ||| |||||||| || || ||| Sbjct 115211313 TTGGATGTCCCATTCGTTCCACGGATGTAGCTGCCAGTGGCACGAATGTTGTGAACAGAA 115211254 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || ||||| ||||| ||| ||| | |||||| ||||| || ||||| || Sbjct 115211253 ACACCAATTCCCCCTGCTGATTTGCTGATGACAGCACACTCCTTCAAAGTATCATATATT 115211194 Query 76934 CCCTCTATACTATCATCCATCAT 76956 ||||||||||||||||| |||| Sbjct 115211193 CCCTCTATACTATCATCTTTCAT 115211171 Score = 93.3 bits (102), Expect = 6e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 ||||| ||||| || | ||| || || ||||||||||||||| ||| ||| | | | | Sbjct 115211007 GTTCCAGCATTGAAAAGTGTTGGGGAAGCATGAGTGAACCATCTTTGAGACATCATGTGG 115210948 Query 77054 TATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAA 77112 || ||| | | | | |||||| || | ||| |||||||| ||||| || | |||||| Sbjct 115210947 TAAGTTCTGACAGCGGATTCTATGTCATCCTTG-TGAATTCCAACAGCAACCCTCATCAA 115210889 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 ||| ||||| || | ||| ||| ||| | | ||||| | ||| || | |||| Sbjct 115210888 CATGTGCTGGGGCCTTTCCACAACCTTTCCTTGAACCTTCAAGAGGTAGGACCTCTCCAG 115210829 Query 77173 AGTTTTAAAACCAAAATA 77190 ||||| |||||||| || Sbjct 115210828 GGTTTTGAAACCAAAGTA 115210811 >seq1 Length=137414913 Score = 87.8 bits (96), Expect = 3e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 || ||||| ||||||||||| || ||||||||| |||| || || |||||||| | Sbjct 128085219 CAAGCAAAGTCACAATGAAGCCCCTCATCTCTAGATATTAGCTCATTTGAAAATGTCAAA 128085278 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGC 46727 || ||||||| ||| | |||||| ||||| |||||||| Sbjct 128085279 CCTGGCATTAATCCTCTCTTTTTAAGCCAGAATATAGC 128085316 >seq9 Length=147089397 Score = 86.0 bits (94), Expect = 9e-12 Identities = 117/162 (72%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 76807 AATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACT 76866 ||| || || ||||| |||||||||||| || || || ||| |||| ||||| Sbjct 92823064 AATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGTG 92823123 Query 76867 AATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926 |||||| | || ||||| ||||| ||| || | |||||| ||||| || || Sbjct 92823124 AATAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 92823183 Query 76927 ATAGATGCCCTCTATACTATCATCCATCATGT-TAAGAAGAA 76967 ||| || ||||||||||||||||| |||| | || |||||| Sbjct 92823184 ATATATTCCCTCTATACTATCATCTTTCATATATATGAAGAA 92823225 >seq8 Length=129606920 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 76798 CATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACG 76857 |||| || ||| || |||||||| |||||||||||| || || || ||| |||| Sbjct 38741319 CATTTGATCAATACCATTAGATGTCCCATTTGTTCCACGTATGTAGCTGCCAATGGCACA 38741378 Query 76858 AATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTT 76917 |||||| || ||| | || ||| | ||||| ||| || | |||||| || Sbjct 38741379 AATATTGTGAACAGAAACACCAATTTCCCCTGCTGATTTGCCAATGACAGCACACTCCTT 38741438 Query 76918 CAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGA 76977 ||| || ||||| || | ||||||||||||||| |||| | | ||| || || ||| Sbjct 38741439 CAAAGTATCATATATTCACTCTATACTATCATCTTTCATATATATAAGGAAGCAACTACT 38741498 Query 76978 CATTTG 76983 || ||| Sbjct 38741499 CAATTG 38741504 >seq2 Length=108997779 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 76798 CATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACG 76857 |||| || ||| || |||||||| |||||||||||| || || || ||| |||| Sbjct 62922197 CATTTGATCAATACCATTAGATGTCCCATTTGTTCCACGTATGTAGCTGCCAATGGCACA 62922138 Query 76858 AATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTT 76917 |||||| || ||| | || ||| | ||||| ||| || | |||||| || Sbjct 62922137 AATATTGTGAACAGAAACACCAATTTCCCCTGCTGATTTGCCAATGACAGCACACTCCTT 62922078 Query 76918 CAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGA 76977 ||| || ||||| || | ||||||||||||||| |||| | | ||| || || ||| Sbjct 62922077 CAAAGTATCATATATTCACTCTATACTATCATCTTTCATATATATAAGGAAGCAACTACT 62922018 Query 76978 CATTTG 76983 || ||| Sbjct 62922017 CAATTG 62922012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929516399360