Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq167436 100 3e-16 seq97145 100 3e-16 >seq167436 Length=640 Score = 100 bits (110), Expect = 3e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 17249 AGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCAT 17308 || ||||||||||| |||||||| |||||||| ||| | ||||| || ||||| ||| Sbjct 97 AGGAGGCTGTACATCTCGGAGTGGATGTTCTCAATGCCGATCTGGAAGCCGTAGAAGGCG 156 Query 17309 CGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATG 17368 || || ||||| | |||||| ||| ||| | | || || || ||| |||||| Sbjct 157 CGCGCCTCCGCGACTTGAACCTCCTTCATGAACCTCCCGGCGAGGTTCTCGAGGACGATG 216 Query 17369 CCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTA 17428 |||||| ||||||||||| || | | ||| | ||||| | || ||||| || || Sbjct 217 CCGTCGGAGGCGGCGAAAAAGGCGAGGACATGGGTGATGAAGTGCTTCTCGTCGGGGGTT 276 Query 17429 AGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTA 17488 || | | | | || | || | ||| ||||| |||| |||||| ||| Sbjct 277 AGGGCTTCGAACTGACGGATGTCCTGAGAAAGATCGACTTCCTCGGCGGTCCAGAAAGAG 336 Query 17489 GCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 ||| | || || || ||||| | ||| || || || || || ||||| Sbjct 337 GCCTCGGCTTTCTTGTACATTTCCCAGATTTCTGGATACTGGATTGGGAA 386 >seq97145 Length=990 Score = 100 bits (110), Expect = 3e-16 Identities = 205/305 (67%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||||| || | || ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct 46 ATATACGACTCCAGAAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGG 105 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||| || || ||||| | |||||| ||| ||| | | || || Sbjct 106 AAGCCGTAGAAGGCGCGCGCCTCCGCGACTTGAACCTCCTTCATGAACCTCCCGGCGAGG 165 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||| ||||| |||||| |||||||| || || | | || | ||||| | Sbjct 166 TTCTCGAGTACGATTCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGCTGATGAAGTGC 225 Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473 || ||||| | || || | | | | ||| | ||| | |||||||| ||| Sbjct 226 TTCTCGTCGTGGGTCAGGGCTTCAAACTGGCGAATATCCTGGGAGAGGTCCACTTCCTCG 285 Query 17474 GGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATG 17533 | |||||| || ||| | || || || ||||| | ||| || || ||| || || Sbjct 286 GCGGTCCAGAAGGAGGCCTCGGCTTTCTTGTACATTTCCCAGATTTCTGGGTACTGGATT 345 Query 17534 GGGAA 17538 ||||| Sbjct 346 GGGAA 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514983587547000