Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq88768 95.1 9e-15 seq264608 86.0 5e-12 >seq88768 Length=3229 Score = 95.1 bits (104), Expect = 9e-15 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || ||||| | ||| |||||||||||||||||| || | Sbjct 1089 ACATGAGCAATCATGCATGTCAAAAGCGCATACGAAGCAATGTTAAATGGCACGCCCAGG 1148 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| ||||| ||||| || |||| ||||| || | || |||| |||||||| Sbjct 1149 CCCATGTCAGCAGATCTCTGGTACATCTGACATGACAACTCCCCATTGGCTACATAAAAC 1208 Query 101876 TG 101877 || Sbjct 1209 TG 1210 >seq264608 Length=4344 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || | ||| | ||| |||||||||||||||||| || | Sbjct 1907 ACATGAGCAATCATGCATGTCAGAAGCGCATATGAAGCAATGTTAAATGGCACGCCCAGG 1848 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| ||||| |||| || |||| ||||| || | || |||| |||||||| Sbjct 1847 CCCATGTCAGCAGATCGCTGGTACATCTGACATGATAACTCCCCATTGGCTACATAAAAC 1788 Query 101876 TG 101877 || Sbjct 1787 TG 1786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359507601327275