Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq265020 87.8 2e-12 >seq265020 Length=820 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || |||||||||||||| || || ||||||| || | |||||||| || |||||| Sbjct 176 CAGGCGAAATCGCAGTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGT 117 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCAGAAAAGAA 24253 || ||||| ||||| || || || ||||| || |||| |||| || ||| || ||||| Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGG-CGCAGAAGCTTCCGGAGAAGAA 58 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAG 24283 || ||||| || || ||||| || || Sbjct 57 GATCCCTTCGACGCAGGCGAAGGCGATCAG 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590782492542000