Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq230935 105 1e-17 >seq230935 Length=680 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| || || || || || || ||| | ||| ||||| Sbjct 627 AATGCAAATCTTTGTTAAGACCCTCACTGGGAAGACCATCACTTTGGAGGTTGAAAGTTC 568 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| |||| | ||| || ||||| || || |||||||| || || || || Sbjct 567 CGACACCATTGATAATGTCAAAGCCAAGATTCAGGACAAGGAAGGTATTCCCCCAGACCA 508 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| ||||| || | ||||| | |||| | | ||||| || Sbjct 507 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTTGCCGATTACAA 448 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||||||||| | || ||||| | ||| | || ||||| || Sbjct 447 CATCCAGAAAGAATCAACCCTTCACTTGGTGCTCCGTCTCCGTGGTGGGAT 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751716256720000