Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq148231 122 6e-23 seq355996 116 2e-21 seq33053 114 8e-21 seq5063 114 8e-21 seq314259 113 3e-20 seq86164 104 2e-17 seq4315 104 2e-17 seq1996 93.3 3e-14 seq15073 82.4 5e-11 >seq148231 Length=1271 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| || | ||| || || ||||| |||||||| |||| || ||| |||| Sbjct 904 AGGACCAAATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCCAAGGTACGACCGTCC 845 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||||||||||||| ||||| || |||| ||||||||| ||| | | ||||||||| Sbjct 844 TCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC 785 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | |||| | || | ||||| || | || ||||| Sbjct 784 TGGATCTTGGCCTTCACGTTGTCTATGGTGTCCGAACTCTCGACTTCTAGGGTAATGGTC 725 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || |||||||||||||||||||| Sbjct 724 TTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 693 Score = 113 bits (124), Expect = 3e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| || || | ||| || || ||||| ||||||||||| | ||| || |||| Sbjct 1132 AGCACAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCC 1073 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || || ||||||||||| ||| | | |||||||| Sbjct 1072 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCC 1013 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | ||| | ||||| |||| || || || Sbjct 1012 TGGATCTTGGCCTTCACGTTGTCAATTGTATCCGAGCTCTCGACCTCCAAAGTAATTGTC 953 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 ||||||||||| ||||||||||| ||||||||| ||| Sbjct 952 TTGCCGGTGAGGGTTTTCACAAAAATCTGCATCCCTC 916 Score = 98.7 bits (108), Expect = 6e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 |||||||| || | ||| || || ||||| |||||||| |||| || ||| |||| Sbjct 676 AGCACCAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCGTCT 617 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | || || || ||||| || |||| ||||||||| || | | |||||||| Sbjct 616 TCAAGTTGTTTCCCAGCGAAGATCAGCCTCTGCTGGTCCGGTGGAATACCTTCCTTGTCT 557 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | |||| || || || | |||||| || Sbjct 556 TGGATCTTAGCCTTCACGTTGTCGATGGTGTCGGAACTCTCCACCTCGAGCGTGATCGTC 497 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 || || ||||| ||||||||||||||||||||| ||| Sbjct 496 TTTCCCGTGAGGGTTTTCACAAAGATCTGCATCCCTC 460 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| |||||||| || | ||| || ||||| ||||| || || | Sbjct 463 CCTCCACGAAGCCTGAGCACCAGATGAAGAGTCGACTCCTTCTGGATGTTATAATCCGCT 404 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| |||||| || ||||| || |||| |||||| || || Sbjct 403 AGGGTTCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGATCCGGCGGA 344 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||| || ||||| ||| | | | | |||| |||| ||||| Sbjct 343 ATTCCTTCCTTATCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCGGAACTCTCGACC 284 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || |||||||| || ||||| || ||||||||||| Sbjct 283 TCCAAAGTGATCGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 237 >seq355996 Length=1690 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||||| || || ||||| ||||||||||||| ||| ||| |||| Sbjct 912 AGGACGAGGTGTAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTTCGGCCGTCC 971 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || || |||||||||||| || | | |||||||| Sbjct 972 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCC 1031 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | |||| |||||||| || | || ||||| Sbjct 1032 TGGATCTTCGCCTTCACATTGTCGATGGTGTCGGAGGATTCGACCTCTAGGGTTATGGTC 1091 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || |||||||| ||||||||||| Sbjct 1092 TTACCCGTAAGGGTTTTCACGAAGATCTGCAT 1123 >seq33053 Length=1800 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | |||||| || |||||||| | || || ||||| ||||||||||||| Sbjct 1567 TCCTCCCCTCAGCCTGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1508 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| |||| || | ||| || || ||||| || || |||||||||||| || Sbjct 1507 TAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGG 1448 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||||| ||| | || | | || | |||| || ||||| Sbjct 1447 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTGTCGGAGGACTCGAC 1388 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||| ||||| || || |||||||| ||||||||||| Sbjct 1387 CTCTAGGGTTATGGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCAT 1340 >seq5063 Length=5799 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||||| || || | ||| || || ||||| |||||||| || | Sbjct 433 TCCTCCACGAAGGCGGAGCACAAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGC 374 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || |||| || |||||||| || ||||| || || ||||||||||| ||| Sbjct 373 GAGGGTGCGACCGTCCTCTAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 314 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||||| ||| | | | | || | |||| ||||| Sbjct 313 AATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGAC 254 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| |||||||| |||||||| |||||||||||||| Sbjct 253 CTCCAAAGTGATGGTCTTGCCGGTTAGAGTTTTGACAAAGATCTGCAT 206 >seq314259 Length=830 Score = 113 bits (124), Expect = 3e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| || || | ||| || || ||||| ||||||||||| | ||| || |||| Sbjct 365 AGCACAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCC 306 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || || ||||||||||| ||| | | |||||||| Sbjct 305 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCC 246 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | ||| | ||||| |||| || || || Sbjct 245 TGGATCTTGGCCTTCACGTTGTCAATTGTATCCGAGCTCTCGACCTCCAAAGTAATTGTC 186 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 ||||||||||| ||||||||||| ||||||||| ||| Sbjct 185 TTGCCGGTGAGGGTTTTCACAAAAATCTGCATCCCTC 149 Score = 113 bits (124), Expect = 3e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | ||||| || ||||| || |||||||| | Sbjct 608 CCACCACGCAGACGGAGGACAAGGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGCA 549 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || ||||||||||| ||||| || ||||| ||||||||||| ||| Sbjct 548 AGTGTGCGACCATCCTCCAACTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGA 489 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | || | || | ||||| Sbjct 488 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTCTCGACC 429 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 |||| ||||| || ||||||||||| || || || |||||||||||| ||| Sbjct 428 TCCAGGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCCCTC 377 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| || | ||| || || ||||| |||||||| |||| || ||| |||| Sbjct 137 AGGACCAAATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCCAAGGTACGACCGTCC 78 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||||||||||||| ||||| || |||| ||||||||| ||| | | ||||||||| Sbjct 77 TCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATCCCCTCCTTGTC 19 >seq86164 Length=2128 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| || | ||| || || || |||||||| || | || ||| |||| Sbjct 121 AGCACCAAATGGAGCGTAGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCGGCCGTCC 180 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || |||| ||||||||| ||| | | ||||||||| Sbjct 181 TCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 240 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||||| | || | | || | || | ||| || || | |||||||| Sbjct 241 TGGATCTTA-GCTTTGACATTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGT 299 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || ||||| |||||||||||||||||||||||| Sbjct 300 CTTTCCGGTAAGAGTTTTCACAAAGATCTGCATC 333 >seq4315 Length=3911 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 |||||||| || | || || ||||| |||||||| |||| || ||| |||| Sbjct 3733 AGCACCAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCC 3674 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || |||||||| |||||||||||||| || | | ||||||||| Sbjct 3673 TCAAGCTGCTTTCCGGCGAAAATCAGCCGCTGCTGGTCCGGCGGAATCCCCTCCTTGTC- 3615 Query 34298 GCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 || ||||| ||| | || | | || | || | || ||||| || | || |||| Sbjct 3614 -CTGGATTTTGGCCTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTTATGG 3556 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 | || || || || |||||||| |||||||||||| Sbjct 3555 TCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 3521 >seq1996 Length=3211 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 |||||||| || | || || ||||| |||||||| |||| || ||| |||| Sbjct 2029 AGCACCAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCC 1970 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || | ||||||||||||| | || | | ||||||||| Sbjct 1969 TCAAGCTGCTTTCCGGCGAAGATCAACCGCTGCTGGTCGGC-GGAATCCCCTCCTTGTCT 1911 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || || ||||| || | || ||||| Sbjct 1910 TGGATCTTGGCCTTCACATTGTCGATTGTGTCCAAGGACTCGACCTCAAGAGTTATGGTC 1851 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || |||||||| ||||||| |||| Sbjct 1850 TTCCCCGTTAGGGTTTTCACGAAGATCTACATC 1818 >seq15073 Length=2851 Score = 82.4 bits (90), Expect = 5e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 34288 CTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCAC 34347 ||||||||| ||||| ||| | || | | || | |||| |||| ||||| || | Sbjct 194 CTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTATCGCTCGACTCGACCTCGAG 253 Query 34348 CGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||||||| || ||||| |||||||||||||||||||||||| Sbjct 254 GGTGATGGTCTTCCCGGTTAGAGTTTTCACAAAGATCTGCATC 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321512675324000