Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq33053 116 3e-21 seq148231 105 6e-18 seq302927 98.7 9e-16 seq355996 95.1 1e-14 seq5063 93.3 4e-14 seq107409 91.5 1e-13 seq230935 89.7 5e-13 seq86164 89.7 5e-13 seq208788 86.0 6e-12 seq15585 86.0 6e-12 seq4315 86.0 6e-12 >seq33053 Length=1800 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || ||||| || || || || ||||| || || ||| | || || || Sbjct 1335 CAACCATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACCATAACCCTAGAGGTCGAGT 1394 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || |||||||||||| | || |||| Sbjct 1395 CCTCCGACACAATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCCG 1454 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 ||||||||||||| || ||||| || |||||| | || ||| || | ||| | Sbjct 1455 ACCAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGAACCCTAGCCGACT 1514 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | ||||| || || || ||||| ||||| ||||| || || |||||||| || Sbjct 1515 ACAACATCCAGAAGGAGTCGACGCTTCACCTGGTTCTCAGGCTGAGGGGAGG 1566 >seq148231 Length=1271 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||||||||| || ||||| || || || || ||||| || || || |||| || || Sbjct 5 AAACATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCATAACTCTCGAGGTCGAGAG 64 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || |||||||||||| | || || || Sbjct 65 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCTGA 124 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||| || || || ||||| || |||||| | |||||| || | ||| || Sbjct 125 CCAGCAACGCCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGAACCCTAGCCGACTA 184 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||||| ||||||||||||||| | || | || |||| Sbjct 185 CAACATCCAGAAGGAGTCGACGCTTCATCTGGTACTTCGTCTTCGCGGTGGTA 237 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| |||||||| | || || || ||| Sbjct 237 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACGATCACTTTGGAGGTCGAGAGTTCC 296 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||| |||||||| | ||||| || ||| Sbjct 297 GACACGATTGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCGCCGGATCAG 356 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG-ATTATAA 31371 ||| | || || ||||| || || ||| |||| ||| || | |||| ||||||| Sbjct 357 CAGAGGCTGATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGAACCCT-AGCGGATTATAA 415 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| || || || ||||||||||||||||| || || || Sbjct 416 CATCCAGAAGGAGTCGACTCTTCATCTGGTGCTCAGGCT 454 >seq302927 Length=390 Score = 98.7 bits (108), Expect = 9e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 31286 GACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAA 31345 |||||||| ||| | || || ||||||||| | || || ||||||||||| ||| |||| Sbjct 88 GACAAGGAGGGCATCCCCCCAGACCAGCAGAGGCTGATTTTCGCTGGCAAGCAGCTGGAG 147 Query 31346 GACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| | ||| | |||||| |||||||| ||||||||||| |||||| |||| || Sbjct 148 GACGGCAGGACCCTTGCCGATTACAACATTCAGAAAGAATCGACCCTTCATTTGGTTCT 206 >seq355996 Length=1690 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || ||||| || || || || || || || || ||| | || || ||| Sbjct 1128 CAACCATGCAGATCTTCGTGAAAACCCTTACGGGTAAGACCATAACCCTAGAGGTCGAAT 1069 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | || || || || |||||||||||| | || |||| Sbjct 1068 CCTCCGACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCTCCCG 1009 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| ||||| ||| | || ||| || | ||| | Sbjct 1008 ACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACGCTCGCCGACT 949 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | ||||| || || || ||||| || || || || || | || ||||| || Sbjct 948 ACAACATCCAGAAGGAGTCGACCCTACACCTCGTCCTCCGCCTCAGGGGAGG 897 >seq5063 Length=5799 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| || || || || ||||| || ||||| || ||||| | || || || Sbjct 202 AATCATGCAGATCTTTGTCAAAACTCTAACCGGCAAGACCATCACTTTGGAGGTCGAGAG 261 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || |||||||||||| | || || || Sbjct 262 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCCCCGGA 321 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || |||||||| || ||||| || ||| | || | ||||| Sbjct 322 CCAGCAGCGTCTGATCTTCGCTGGAAAGCAGTTAGAGGACGGTCGCACCCTCGCTGATTA 381 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||||||||| || || Sbjct 382 CAACATCCAGAAGGAGAGCACTCTTCATCTTGTGCT 417 >seq107409 Length=3443 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || |||||||| || ||||| || || ||| | || |||||| || Sbjct 2193 CATGCAAATTTTTGTTAAGACTCTTACGGGCAAGACCATAACCCTTGAGGTTGAAAGCTC 2134 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | || ||||||||||||| | || || || || Sbjct 2133 TGACACAATTGACAACGTAAAGGCTAAGATTCAGGACAAGGAAGGCATTCCACCAGATCA 2074 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || |||||||| || ||| | || ||| | ||| | || || || Sbjct 2073 GCAGAGGCTCATCTTCGCTGGAAAGCAGCTTGAGGACGGGAGGACCCTTGCAGACTACAA 2014 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| || ||||| || || ||| | || | || |||| Sbjct 2013 TATCCAGAAGGAATCAACCCTTCACCTCGTCCTTCGTCTCCGTGGTGGTA 1964 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| |||| || || || || ||| | || |||||| || Sbjct 2420 ATGCAGATTTTTGTGAAGACCTTGACGGGAAAGACTATTACCCTTGAGGTTGAAAGCTCA 2361 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || ||||||||||||| | || || |||||| Sbjct 2360 GACACAATTGACAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCACCAGACCAG 2301 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| || ||| | || || ||| | || |||||| Sbjct 2300 CAGAGGCTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACTCTCGCTGACTATAAC 2241 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| |||||||| | ||| |||| || Sbjct 2240 ATCCAAAAGGAATCGACCTTACATTTGGTTCT 2209 >seq230935 Length=680 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || || || || || ||||| | || |||||| ||| Sbjct 626 ATGCAAATCTTTGTTAAGACCCTCACTGGGAAGACCATCACTTTGGAGGTTGAAAGTTCC 567 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || |||||||||||| | || || |||||| Sbjct 566 GACACCATTGATAATGTCAAAGCCAAGATTCAGGACAAGGAAGGTATTCCCCCAGACCAG 507 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || || || ||| | || ||| | || | |||||| ||| Sbjct 506 CAGAGGCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTTGCCGATTACAAC 447 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || |||||||| || ||||| |||| || Sbjct 446 ATCCAGAAAGAATCAACCCTTCACTTGGTGCT 415 >seq86164 Length=2128 Score = 89.7 bits (98), Expect = 5e-13 Identities = 166/243 (68%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 31181 ATTGAATCAAACA--TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCG 31238 |||| ||||||| |||| || || || || ||||| || || || || |||||| ||| Sbjct 346 ATTGGGTCAAACAGATGCAGATCTTTGTGAAAACTCTTACCGGAAAGACCATCACCCTCG 287 Query 31239 ACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCG 31298 | || ||| || |||| |||| | |||||| | || |||||||| || Sbjct 286 AGGTGGAAAGCTCTGACACCATCGACAATGTCAAAGCTAAGATCCAAGACAAGGAGGGTA 227 Query 31299 TGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTA 31358 | || || ||||||||| | || || ||||| ||||| ||| | || ||| || Sbjct 226 TTCCCCCAGACCAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCC 167 Query 31359 TGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCG 31418 | ||||| ||||||||||| || || || || ||| |||| ||| | || | || | Sbjct 166 TTGCTGATTACAACATTCAAAAGGAGTCTACGCTCCATTTGGTGCTTCGCCTCCGTGGTG 107 Query 31419 GTA 31421 ||| Sbjct 106 GTA 104 >seq208788 Length=2051 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| |||| || || || || || | || || ||| || Sbjct 559 ATGCAGATTTTTGTGAAGACATTGACGGGAAAGACCATTACTCTTGAGGTCGAAAGCTCA 618 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || ||| ||||||||| | || || |||||| Sbjct 619 GACACAATTGACAATGTCAAAACTAAGATCCAGGAGAAGGAAGGCATCCCACCAGACCAG 678 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | ||||| || || || || ||| | || ||| ||| | || |||||| Sbjct 679 CAGAGGCTAATCTTTGCGGGAAAGCAGCTTGAGGACGGCCGTACTCTTGCTGACTATAAC 738 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| |||||||| || ||| |||| || Sbjct 739 ATTCAAAAGGAATCGACCCTACATTTGGTTCT 770 >seq15585 Length=2740 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||||||||| || ||||| || || || || ||||| || || || |||| || || Sbjct 5 AAACATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCATAACTCTCGAGGTCGAGAG 64 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || |||||||||||| | ||||| || Sbjct 65 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCGCCGGA 124 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||| || | || ||||| || |||||| | |||||| || | ||| || Sbjct 125 CCAGCAACGCTTGATCTTCGCCGGAAAACAGCTTGAAGACGGCCGAACCCTAGCCGACTA 184 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || || || || || ||||| || ||| Sbjct 185 CAACATCCAGAAGGAGTCCACGCTCCATCTCGTTCTT 221 >seq4315 Length=3911 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || || || ||| | || || || Sbjct 3517 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTTGAGGTCGAGT 3576 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | || |||| |||| | || || | ||| ||||||||| || | ||||| | Sbjct 3577 CCTCGGACACCATCGACAATGTGAAGGCCAAAATCCAGGACAAGGAGGGGATTCCGCCGG 3636 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| || || ||| | || ||| || | ||||| Sbjct 3637 ACCAGCAGCGGCTGATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGAACCCTAGCCGATT 3696 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | ||||| || || || || || || |||||||| || | || ||||| || Sbjct 3697 ACAACATCCAGAAGGAGTCAACCCTCCATCTGGTGCTCCGCCTCAGGGGAGG 3748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443559717018000