Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq265020 98.7 1e-15 seq237122 95.1 2e-14 seq185790 82.4 1e-10 >seq265020 Length=820 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||||||||||||||| || ||||||| || | ||||| || || |||||| Sbjct 176 CAGGCGAAATCGCAGTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGT 117 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| ||||| || || || ||||| || |||| ||| |||||| |||||| Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAG 57 Query 33702 ATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTC 33736 || ||||| || ||| || ||||| || || | ||| Sbjct 56 ATCCCTTCGAC-GCAGGCGAAGGCGATCAGACGCTC 22 >seq237122 Length=485 Score = 95.1 bits (104), Expect = 2e-14 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || |||||||||||||| ||||||| || | ||||| || || |||||| Sbjct 176 CAAGCAAAGTCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGT 117 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| ||||| || || || ||||| || |||| ||| |||||| |||||| Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAG 57 Query 33702 ATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTC 33736 || ||||| || ||| || ||||| || || | ||| Sbjct 56 ATCCCTTCGAC-GCAGGCGAAGGCGATCAGACGCTC 22 >seq185790 Length=5091 Score = 82.4 bits (90), Expect = 1e-10 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481 ||| || ||||| | || | ||| |||| ||| | || | | |||||||| ||| || Sbjct 2524 TCCCCCTTGATCAACATACCGAGCAGTGTCATTGAACACCCGTAGCATTGGAACAATGCC 2465 Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541 || ||| | ||||| || || ||||| | ||| | | |||||||| || ||| Sbjct 2464 ATTAGATGTCCCATTTGTTCCCCGAATATAACTTCCCATCGAGCGAATATTGTGAACTGA 2405 Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601 | ||| ||||| || || |||| || | ||| || || || ||||| || || Sbjct 2404 GACACCAATTCCTCCAGCTGATTTACTTATAACTGCACACTCCTTCAAGGTGTCGTATAT 2345 Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63644 |||||| ||||||||||| ||||| | || || |||||| Sbjct 2344 GCCTTCAATGCTATCATCTTTCATGCACAACAGGAAGCAGCTA 2302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626699806062000