Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq265020 100 4e-16 seq237122 95.1 2e-14 seq185790 91.5 2e-13 >seq265020 Length=820 Score = 100 bits (110), Expect = 4e-16 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||||||||||||||| || ||||||| || || |||||||| || |||||| Sbjct 176 CAGGCGAAATCGCAGTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGT 117 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAAAGAA 50078 || ||||| ||||| || || || ||||| || |||| |||| || || || ||||| Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGG-CGCAGAAGCTTCCGGAGAAGAA 58 Query 50079 GATTCCTTCTACTGCGGCAAAGGC 50102 ||| ||||| || ||| ||||| Sbjct 57 GATCCCTTCGACGCAGGCGAAGGC 34 >seq237122 Length=485 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || |||||||||||||| ||||||| || || |||||||| || |||||| Sbjct 176 CAAGCAAAGTCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGT 117 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAAAGAA 50078 || ||||| ||||| || || || ||||| || |||| |||| || || || ||||| Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGG-CGCAGAAGCTTCCGGAGAAGAA 58 Query 50079 GATTCCTTCTACTGCGGCAAAGGC 50102 ||| ||||| || ||| ||||| Sbjct 57 GATCCCTTCGACGCAGGCGAAGGC 34 >seq185790 Length=5091 Score = 91.5 bits (100), Expect = 2e-13 Identities = 156/224 (70%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 ||| || ||||| | || | ||| |||| ||| | || | | |||||||| ||| || Sbjct 2524 TCCCCCTTGATCAACATACCGAGCAGTGTCATTGAACACCCGTAGCATTGGAACAATGCC 2465 Query 80154 ATTGGATGTACCATTGGT-CCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 80212 ||| ||||| ||||| || ||| || ||||| ||||| | | |||||||| || || Sbjct 2464 ATTAGATGTCCCATTTGTTCCCCGA-ATATAACTTCCCATCGAGCGAATATTGTGAACTG 2406 Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272 | | ||| ||||| || || |||| || | ||| || || || || || || | Sbjct 2405 AGACACCAATTCCTCCAGCTGATTTACTTATAACTGCACACTCCTTCAAGGTGTCGTATA 2346 Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316 |||| || ||||||||||| ||||| | || || |||||| Sbjct 2345 TGCCTTCAATGCTATCATCTTTCATGCACAACAGGAAGCAGCTA 2302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714713144981000