Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq265020 100 4e-16
seq237122 95.1 2e-14
seq185790 91.5 2e-13
>seq265020
Length=820
Score = 100 bits (110), Expect = 4e-16
Identities = 110/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| ||||||||||||||||| || ||||||| || || |||||||| || ||||||
Sbjct 176 CAGGCGAAATCGCAGTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGT 117
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAAAGAA 50078
|| ||||| ||||| || || || ||||| || |||| |||| || || || |||||
Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGG-CGCAGAAGCTTCCGGAGAAGAA 58
Query 50079 GATTCCTTCTACTGCGGCAAAGGC 50102
||| ||||| || ||| |||||
Sbjct 57 GATCCCTTCGACGCAGGCGAAGGC 34
>seq237122
Length=485
Score = 95.1 bits (104), Expect = 2e-14
Identities = 109/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || |||||||||||||| ||||||| || || |||||||| || ||||||
Sbjct 176 CAAGCAAAGTCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGT 117
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAAAGAA 50078
|| ||||| ||||| || || || ||||| || |||| |||| || || || |||||
Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGG-CGCAGAAGCTTCCGGAGAAGAA 58
Query 50079 GATTCCTTCTACTGCGGCAAAGGC 50102
||| ||||| || ||| |||||
Sbjct 57 GATCCCTTCGACGCAGGCGAAGGC 34
>seq185790
Length=5091
Score = 91.5 bits (100), Expect = 2e-13
Identities = 156/224 (70%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
||| || ||||| | || | ||| |||| ||| | || | | |||||||| ||| ||
Sbjct 2524 TCCCCCTTGATCAACATACCGAGCAGTGTCATTGAACACCCGTAGCATTGGAACAATGCC 2465
Query 80154 ATTGGATGTACCATTGGT-CCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 80212
||| ||||| ||||| || ||| || ||||| ||||| | | |||||||| || ||
Sbjct 2464 ATTAGATGTCCCATTTGTTCCCCGA-ATATAACTTCCCATCGAGCGAATATTGTGAACTG 2406
Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
| | ||| ||||| || || |||| || | ||| || || || || || || |
Sbjct 2405 AGACACCAATTCCTCCAGCTGATTTACTTATAACTGCACACTCCTTCAAGGTGTCGTATA 2346
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316
|||| || ||||||||||| ||||| | || || ||||||
Sbjct 2345 TGCCTTCAATGCTATCATCTTTCATGCACAACAGGAAGCAGCTA 2302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 714713144981000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |