Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq265020 89.7 7e-13 seq237122 86.0 8e-12 >seq265020 Length=820 Score = 89.7 bits (98), Expect = 7e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||||||||||||||| || || |||| || | |||||||| || |||||| Sbjct 176 CAGGCGAAATCGCAGTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGT 117 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCAGAAAAGAA 42183 || ||||| ||||| || || || ||||| || || | |||| || ||| || ||||| Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAAT-GGCGCAGAAGCTTCCGGAGAAGAA 58 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 42219 ||| ||||| || || ||||| || || | ||| Sbjct 57 GATCCCTTCGACGCAGGCGAAGGCGATCAGACGCTC 22 >seq237122 Length=485 Score = 86.0 bits (94), Expect = 8e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || || |||||||||||||| || |||| || | |||||||| || |||||| Sbjct 176 CAAGCAAAGTCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGT 117 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCAGAAAAGAA 42183 || ||||| ||||| || || || ||||| || || | |||| || ||| || ||||| Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAAT-GGCGCAGAAGCTTCCGGAGAAGAA 58 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 42219 ||| ||||| || || ||||| || || | ||| Sbjct 57 GATCCCTTCGACGCAGGCGAAGGCGATCAGACGCTC 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667816851229000