Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq237122 105 1e-17
seq265020 102 1e-16
>seq237122
Length=485
Score = 105 bits (116), Expect = 1e-17
Identities = 119/157 (76%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 125417 CGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TG 125475
|||||| | ||| | || |||||| ||| || || |||||||| || || || || ||
Sbjct 18 CGCCGAGCGTCTGATCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGAAGCTTCTG 77
Query 125476 CGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGT 125535
|| |||| || ||||||||||| || || |||||||| ||||| || | ||||||
Sbjct 78 CG-CCATTTTCTGGCTCAAGAAACGAGGCCTCATGCCGGGACTCACCTTCTCCAACGAGC 136
Query 125536 TTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
| || || |||||||| || || ||||| ||||||||
Sbjct 137 TGATCTCACGAGACGAAGGTCTGCACTGCGACTTTGC 173
>seq265020
Length=820
Score = 102 bits (112), Expect = 1e-16
Identities = 119/158 (75%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 125417 CGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TG 125475
|||||| | ||| | || |||||| ||| || || |||||||| || || || || ||
Sbjct 18 CGCCGAGCGTCTGATCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGAAGCTTCTG 77
Query 125476 CGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGT 125535
|| |||| || ||||||||||| || || |||||||| ||||| || | ||||||
Sbjct 78 CG-CCATTTTCTGGCTCAAGAAACGAGGCCTCATGCCGGGACTCACCTTCTCCAACGAGC 136
Query 125536 TTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573
| || || |||||||| ||||| ||||| || || |||
Sbjct 137 TGATCTCGCGAGACGAAGGCCTGCACTGCGATTTCGCC 174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 737390725379000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |