Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq5063 107 2e-18 seq86164 104 2e-17 seq314259 102 7e-17 seq148231 102 7e-17 seq4315 102 7e-17 seq208788 98.7 8e-16 seq107409 87.8 2e-12 >seq5063 Length=5799 Score = 107 bits (118), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | |||||| ||||||||||| || |||||||||||||| | || ||||||| Sbjct 415 CACAAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGGGTGCGACCGTCCTC 356 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 | |||||| || || | || | ||||||||| ||| || | | |||||||||| Sbjct 355 TAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTG 296 Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 || || ||||| | | || ||||| |||| ||| ||| | || ||||| Sbjct 295 GATCTTGGCCTTGACGTTGTCG--ATGGTGTCGGAGCTCTCGACCTCCAAAGTGATGGTC 238 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| |||||||| ||||| |||||||| Sbjct 237 TTGCCGGTTAGAGTTTTGACAAAGATCTGCAT 206 >seq86164 Length=2128 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| ||||| || || |||||||||||||||||||||||| | ||| ||||||| Sbjct 123 CACCAAATGGAGCGTAGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCGGCCGTCCTC 182 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| ||| || | || | | |||||| || || | || |||||||| Sbjct 183 GAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTG 242 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || |||| | | ||||| || | ||| ||||| || ||||| || Sbjct 243 GATCTTAGCTTTGACATTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTT 302 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTTGATCGAAGAAA 48745 ||||| |||||||||||||| ||||||||| ||| |||| | || ||| Sbjct 303 TCCGGTAAGAGTTTTCACAAAGATCTGCATC-TGT-TTGACCCAATAAA 349 >seq314259 Length=830 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | ||| || ||||||||||| || |||||||| ||||| | || ||||||| Sbjct 363 CACAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCCTC 304 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||| ||| | | || | ||||||||| ||| || | | |||||||||| Sbjct 303 CAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTG 244 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | || ||||| | ||| ||| | || || || || Sbjct 243 GATCTTGGCCTTCACGTTGTCAATTGTATCCGAGCTCTCGACCTCCAAAGTAATTGTCTT 184 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 |||||||| ||||||||||||||||||||| Sbjct 183 GCCGGTGAGGGTTTTCACAAAAATCTGCATC 153 >seq148231 Length=1271 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || |||||||| ||||||||||| || ||||||||||| ||||| || |||||||| Sbjct 901 ACCAAATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCCAAGGTACGACCGTCCTCC 842 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 | |||||| ||| || | || | | |||||| ||| || | | ||||||||| Sbjct 841 AACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGG 782 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || || ||| | ||||||| || | | ||| || | || ||||| || Sbjct 781 ATCTTGGCCTTCACGTTGTCTATGGTGTCCGAACTCTCGACTTCTAGGGTAATGGTCTTG 722 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || ||||||||||| |||||||| Sbjct 721 CCGGTAAGGGTTTTCACAAAGATCTGCAT 693 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | ||| || ||||||||||| || |||||||| ||||| | || ||||||| Sbjct 1130 CACAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCCTC 1071 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||| ||| | | || | ||||||||| ||| || | | |||||||||| Sbjct 1070 CAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTG 1011 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | || ||||| | ||| ||| | || || || || Sbjct 1010 GATCTTGGCCTTCACGTTGTCAATTGTATCCGAGCTCTCGACCTCCAAAGTAATTGTCTT 951 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 |||||||| ||||||||||||||||||||| Sbjct 950 GCCGGTGAGGGTTTTCACAAAAATCTGCATC 920 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | | | ||| | |||||| ||||||||||| || ||||||||||| || Sbjct 692 ACCTCCACGAAGACGAAGCACCAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGC 633 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | ||| |||| || || || || || || | || | | |||||| ||| || Sbjct 632 GAGGGTTCGGCCGTCTTCAAGTTGTTTCCCAGCGAAGATCAGCCTCTGCTGGTCCGGTGG 573 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | || ||||||||| || || ||| | | | || ||||| |||| | |||| Sbjct 572 AATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCG--ATGGTGTCGGAACTCTCC 515 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || || || || || ||||| ||||||||||| ||||||||| Sbjct 514 ACCTCGAGCGTGATCGTCTTTCCCGTGAGGGTTTTCACAAAGATCTGCATC 464 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | ||| | ||| | |||||| || |||||| || ||||| ||||| || Sbjct 463 CCTCCACGAAGCCTGAGCACCAGATGAAGAGTCGACTCCTTCTGGATGTTATAATCCGCT 404 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | ||| |||||||||||||||| ||| || | || | | |||||||||| ||| Sbjct 403 AGGGTTCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGATCCGGCGGA 344 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||| ||| || || ||||| | || || |||| | ||| | Sbjct 343 ATTCCTTCCTTATCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCGGAACTCTCGACC 284 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || || ||||| || ||||| || || |||||||| Sbjct 283 TCCAAAGTGATCGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 237 >seq4315 Length=3911 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | ||| || || |||||| || ||||||||||| || | ||| ||||||| Sbjct 3731 CACCAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCCTC 3672 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| ||| || |||| | |||||||| ||| ||| | | ||||||||| Sbjct 3671 AAGCTGCTTTCCGGCGAAAATCAGCCGCTGCTGGTCCGGCGGAATCCCCTCCTTGTCCTG 3612 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||||| ||| | | | ||||| || | ||||| ||| | |||||||| || Sbjct 3611 GATTTTGGCCTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTTATGGTCTT 3552 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 || || || |||||||| || ||||||||| Sbjct 3551 CCCCGTTAGGGTTTTCACGAAGATCTGCATC 3521 >seq208788 Length=2051 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576 ||||||||||| || |||||||| |||||||||||||| | | || || ||||||| Sbjct 539 ACTAAATGAAGGGTTGATTCCTTTTGGATGTTGTAATCAGCGAGAGTG-CGACCGTCCTC 481 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| ||| || | || || | |||||||| || | | ||||||||| Sbjct 480 AAGCTGCTTTCCGGCGAAGATCAACCTTTGCTGATCTGGGGGAATTCCCTCCTTGTCCTG 421 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||||| ||||| | | |||||||| | ||| ||||| || ||||| || Sbjct 420 GATTTTAGCCTTGACATTGTCGATGGTATCCGAGCTCTCGACCTCGAGAGTGATGGTCTT 361 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 || || || |||||||| || || |||||| Sbjct 360 TCCAGTAAGGGTTTTCACGAAGATTTGCATC 330 >seq107409 Length=3443 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT-CGTCCTCCAGCT 48581 |||||| ||| |||||| |||||||||||||||||||| ||| | | |||||||||| Sbjct 1305 ATGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAA-AGTCCTTCCATCCTCCAGCT 1363 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| || | | || | | |||||| || ||| | | ||||||||| ||||| Sbjct 1364 GCTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATTT 1423 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | | || || || | |||| ||| | || ||||| || || | Sbjct 1424 TTGCCTTGACATTATCAATAGTGTCCGAGCTCTCCACCTCCAAAGTGATGGTCTTCCCAG 1483 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 | | || |||||||| |||||||| Sbjct 1484 TCAAGGTCTTCACAAAGATCTGCAT 1508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419218008046025