Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq148016 116 2e-21 seq158019 113 2e-20 seq96178 113 2e-20 seq386293 107 1e-18 seq381672 107 1e-18 seq320771 107 1e-18 seq7580 107 1e-18 seq45909 105 3e-18 seq8346 105 3e-18 seq1637 105 3e-18 seq111318 104 1e-17 seq186880 102 4e-17 seq55637 91.5 8e-14 seq844 91.5 8e-14 seq211565 89.7 3e-13 seq10697 84.2 1e-11 >seq148016 Length=1616 Score = 116 bits (128), Expect = 2e-21 Identities = 75/83 (90%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 11447 AAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCT 11506 |||| ||||||||||||| | | |||||||| ||||||||||||||||||||||||||| Sbjct 83 AAATAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCT 24 Query 11507 CTRACCAACTGAGCTAATGGGCC 11529 || ||||||||||||||| |||| Sbjct 23 CTAACCAACTGAGCTAATAGGCC 1 >seq158019 Length=983 Score = 113 bits (124), Expect = 2e-20 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| Sbjct 335 ATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 276 Query 11514 ACTGAGCTAATGGGCCGTCGA 11534 ||||||||||| |||| |||| Sbjct 275 ACTGAGCTAATAGGCCTTCGA 255 >seq96178 Length=5279 Score = 113 bits (124), Expect = 2e-20 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2034 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1975 Query 11516 TGAGCTAATGGGCCGTCGACG 11536 ||||||||| |||||| |||| Sbjct 1974 TGAGCTAATAGGCCGTTGACG 1954 >seq386293 Length=1811 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 294 AAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 235 Query 11513 AACTGAGCTAATGGGCCG 11530 |||||||||||| ||||| Sbjct 234 AACTGAGCTAATAGGCCG 217 >seq381672 Length=3388 Score = 107 bits (118), Expect = 1e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| Sbjct 652 ATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 711 Query 11514 ACTGAGCTAATGGGCC 11529 ||||||||||| |||| Sbjct 712 ACTGAGCTAATAGGCC 727 >seq320771 Length=4580 Score = 107 bits (118), Expect = 1e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1215 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1156 Query 11516 TGAGCTAATGGGCCGT 11531 ||||||||| |||||| Sbjct 1155 TGAGCTAATAGGCCGT 1140 >seq7580 Length=4865 Score = 107 bits (118), Expect = 1e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| Sbjct 1820 ATTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 1761 Query 11514 ACTGAGCTAATGGGCC 11529 ||||||||||| |||| Sbjct 1760 ACTGAGCTAATAGGCC 1745 >seq45909 Length=1509 Score = 105 bits (116), Expect = 3e-18 Identities = 76/88 (86%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 11445 AAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||| | |||| ||||||||| | | |||||||| |||||||||||||||||||||| Sbjct 238 AAAAGTAAAATATCTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACG 297 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| ||||||||||||||| |||| Sbjct 298 ACGCTCTAACCAACTGAGCTAATAGGCC 325 >seq8346 Length=1819 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 487 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 546 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||| ||||| Sbjct 547 TGAGCTAATAGGCCG 561 Score = 91.5 bits (100), Expect = 8e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 11474 AACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct 732 AACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCG 788 >seq1637 Length=4007 Score = 105 bits (116), Expect = 3e-18 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||| ||||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 3847 AAAAAAAAAAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 3906 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||| |||||||||| |||| Sbjct 3907 CTCTAACCAGCTGAGCTAATAGGCC 3931 >seq111318 Length=1514 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1206 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1147 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 1146 TGAGCTAATAGGCC 1133 >seq186880 Length=454 Score = 102 bits (112), Expect = 4e-17 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 11457 GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACT 11516 |||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1 GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACT 60 Query 11517 GAGCTAATGGGCC 11529 |||||||| |||| Sbjct 61 GAGCTAATAGGCC 73 >seq55637 Length=2891 Score = 91.5 bits (100), Expect = 8e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 11474 AACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct 1 AACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCG 57 >seq844 Length=3388 Score = 91.5 bits (100), Expect = 8e-14 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 11427 GGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486 ||||| | || ||||| ||| || ||||||||||| | | |||||||| |||||| Sbjct 2979 GGAAAAAAAGTCTTAATCCCAAAACACATTGGCCCATGCAGGTCTCGAACCT--GACCTT 2922 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 || ||||| |||||||||| || ||||||| ||||||| |||| Sbjct 2921 CGTGTTATCAGCACGACGCGCTAACCAACTTAGCTAATAGGCC 2879 >seq211565 Length=665 Score = 89.7 bits (98), Expect = 3e-13 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 11474 AACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 154 AACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 209 >seq10697 Length=1019 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 11449 ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCT 11508 || ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| Sbjct 955 ATAAAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCT 1014 Query 11509 RACCA 11513 |||| Sbjct 1015 AACCA 1019 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260229098422900