Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq36584 143 4e-30 seq151917 141 1e-29 seq151109 134 2e-27 seq134662 132 8e-27 seq139724 127 3e-25 seq230275 109 9e-20 seq217350 95.1 2e-15 seq183282 89.7 8e-14 seq10735 89.7 8e-14 seq25963 84.2 3e-12 >seq36584 Length=4105 Score = 143 bits (158), Expect = 4e-30 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| |||||||| ||||| || ||||| || |||||| | ||||| Sbjct 3675 TCTTCGCGACAACATCCAGGGAATCACGAAGCCGGCGATCCGACGGCTGGCTAGGCGTGG 3734 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || ||| | || || ||| |||| || |||| |||| || | |||||||| Sbjct 3735 CGGCGTAAAGAGAATCAGCGGCTTGATCTACGAGGAGACACGTGGCGTCCTCAAGATCTT 3794 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 |||| ||| ||| |||| ||||| || || |||||||||||| || ||||| || Sbjct 3795 CCTCGAGAACGTCATCCGCGATGCCGTCACTTACACCGAGCACGCTCGTCGGAAGACCGT 3854 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 ||| ||||||| | ||||| || | || || || ||||||| Sbjct 3855 CACGGCCATGGACGTAGTCTACGCTCTCAAGCGCCAGGGCCGTA 3898 >seq151917 Length=3902 Score = 141 bits (156), Expect = 1e-29 Identities = 176/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||| ||||| || ||||| || ||||| | ||||| Sbjct 412 TCTTCGCGACAACATCCAGGGGATCACGAAGCCGGCGATCCGACGGCTGGCGAGACGTGG 353 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || ||| | || || || |||| || |||| |||| || | |||||||| Sbjct 352 CGGTGTGAAGAGAATCAGCGGCCTGATCTACGAGGAGACACGTGGAGTCCTCAAGATCTT 293 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 |||| ||| ||| |||| || || || ||| |||||||||||| || ||||| || Sbjct 292 CCTCGAGAACGTCATCCGCGACGCCGTCACCTACACCGAGCACGCTCGCCGGAAGACCGT 233 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||| ||||||| ||||||| || | || || || ||||||| | || || ||||| Sbjct 232 CACCGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGGCCGTACTCTCTACGGCTTTGG 173 Query 16693 A 16693 | Sbjct 172 A 172 >seq151109 Length=2277 Score = 134 bits (148), Expect = 2e-27 Identities = 197/275 (72%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| | | | || || |||| |||||||| || ||||||||||| || | Sbjct 999 CGCCAAGCGTCACAGGA-AGGTCCTCAGAGACAACATCCAGGGCATCACCAAGCCCGCGA 1057 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||||||||| | || || || |||||| || || || ||||||| |||| Sbjct 1058 TTCGGCGTCTGGCTCGCAGAGGCGGTGTGAAGCGTATCAGCGGTCTGATCTATGAGGAGA 1117 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | ||| | ||||| || | ||| ||| || | ||||| || ||| |||| Sbjct 1118 CCAGAGGAGTTCTCAAGATTTTTTTGGAGAACGTGATTCGCGATGCCGTCACCTACACCG 1177 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||||| | ||||| |||||| ||||||| |||||||||| ||||| | || | Sbjct 1178 AGCACGCTAGGAGGAAGACCGTCACCGCCATGGACGTCGTCTATGCCTTGAAGAGGCAGG 1237 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 | | | | || |||||||| ||| || |||| Sbjct 1238 GAAGGACTCTCTACGGTTTTGGTGGTTGAT-TTCT 1271 >seq134662 Length=1055 Score = 132 bits (146), Expect = 8e-27 Identities = 191/267 (72%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| | || || || || |||||||| || ||||| |||||||| || Sbjct 54 GCCAAGCGTCACCGCAAGGTC-CTCCGCGACAACATCCAGGGGATCACGAAGCCAGCGAT 112 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||||||||| | || || || |||||| || || || |||| || |||| Sbjct 113 TCGGCGTCTGGCTCGCAGAGGCGGTGTGAAGCGTATCAGCGGTCTGATCTACGAGGAGAC 172 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| | ||||||||| | ||| ||| |||| || || || ||| || || Sbjct 173 CAGAGGAGTTCTTAAGATCTTCTTGGAGAACGTGATCCGCGACGCCGTCACCTACACGGA 232 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| | | ||||| |||||| ||||||| |||||||||| | || | || || Sbjct 233 GCACGCCAGGAGGAAGACGGTCACCGCCATGGACGTCGTCTATGCTCTCAAGAGGCAGGG 292 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | | || ||||| ||| |||| Sbjct 293 CAGGACTCTCTACGGTTTCGGAGGTTA 319 >seq139724 Length=933 Score = 127 bits (140), Expect = 3e-25 Identities = 190/267 (71%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| | || || || || |||||||| |||||||| ||||| || || Sbjct 606 GCCAAGCGTCACCGCAAGGTC-CTCCGCGACAACATCCAGGGAATCACGAAGCCGGCGAT 664 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||||||||| | ||||| || ||||| || || || |||| || |||| Sbjct 665 TCGGCGTCTGGCTCGCAGAGGTGGTGTGAAGCGCATCAGCGGTCTGATCTACGAGGAGAC 724 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| | ||||||||| | ||| ||| |||| ||| || || ||| || || Sbjct 725 CAGAGGGGTTCTTAAGATCTTCTTGGAGAACGTGATCCGTGACGCCGTCACCTACACGGA 784 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| |||| | ||||| |||||| ||||||| |||| || || | || | || || Sbjct 785 GCATGCTAGGAGGAAGACCGTCACCGCCATGGACGTCGTTTACGCTCTCAAGAGGCAGGG 844 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | | || |||||||| |||| Sbjct 845 CAGGACTCTCTACGGTTTTGGCGGTTA 871 >seq230275 Length=1608 Score = 109 bits (120), Expect = 9e-20 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||| ||||||||||| || || || | || |||||| | || || | Sbjct 2 GAGACAACATCCAAGGCATCACCAAGCCGGCCATTCGCAGGCTCGCTCGTAGAGGAGGTG 61 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||||| || || | |||||||||||| | | || | ||||| ||||| Sbjct 62 TGAAGCGCATCAGCGGTCTCATCTATGAAGAGACCAGAGGAGTGCTTAAGATTTTCCTGG 121 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | || |||| ||||| || || ||||||||||| | | ||||| |||||| Sbjct 122 AAAATGTCATCCGCGATGCCGTCACTTACACCGAGCACGCCAGGAGGAAGACCGTCACCG 181 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | ||||| |||| ||||| | || | || ||||||| | |||| || || || Sbjct 182 CTATGGACGTCGTTTATGCGCTCAAGAGGCAGGGCCGTACGCTTTACGGCTTCGG 236 >seq217350 Length=3972 Score = 95.1 bits (104), Expect = 2e-15 Identities = 156/224 (70%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| | |||||||| || ||||| ||||| |||||| | || |||||| | ||||| Sbjct 1234 TCTTCGCAACAACATCCAGGGGATCACGAAGCCGGCTATCTGACGCCTGGCTAGGCGTGG 1293 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 | || ||| | || | | | ||| | |||| |||| || | ||||||| Sbjct 1294 CGCCGTGAAGAGAATCAGAGCCT-GATCTCCTAGGAGACACGTGGCGTCCTCAAGATCTA 1352 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 |||| ||| | | | || || | || ||| |||||||||||| || || ||||| Sbjct 1353 CCTCGAGAACATCAGCCGAGACGTCGTCACCTACACCGAGCACGCTCGCCGGAACACTGT 1412 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 |||| |||||| ||||||| || | || || ||||||||| Sbjct 1413 CACCGTCATGGACGTCGTCTACCCACTCAAGCGCTAAGGCCGTA 1456 >seq183282 Length=1421 Score = 89.7 bits (98), Expect = 8e-14 Identities = 149/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 16463 AACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAG 16522 |||||||| || ||||| ||||| |||||| | || |||||| | ||||| | || ||| Sbjct 1252 AACATCCAGGGGATCACGAAGCCGGCTATCTGACGCCTGGCTAGGCGTGGCGCCGTGAAG 1193 Query 16523 CGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACC 16582 | || | | | ||| | |||| |||| || | ||||||| |||| ||| | Sbjct 1192 AGAATCAGAGCCT-GATCTCCTAGGAGACACGTGGCGTCCTCAAGATCTACCTCGAGAAC 1134 Query 16583 GTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATG 16642 | | || || | || ||| |||||||||||| || || ||||||||| |||| Sbjct 1133 ATCAGCCGAGACGTCGTCACCTACACCGAGCACGCTCGCCGGAACACTGTCACCGTCATG 1074 Query 16643 GATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 || ||||||| || | || || ||||||||| Sbjct 1073 GACGTCGTCTACCCACTCAAGCGCTAAGGCCGTA 1040 >seq10735 Length=3561 Score = 89.7 bits (98), Expect = 8e-14 Identities = 149/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 16463 AACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAG 16522 |||||||| || ||||| ||||| |||||| | || |||||| | ||||| | || ||| Sbjct 3304 AACATCCAGGGGATCACGAAGCCGGCTATCTGACGCCTGGCTAGGCGTGGCGCCGTGAAG 3363 Query 16523 CGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACC 16582 | || | | | ||| | |||| |||| || | ||||||| |||| ||| | Sbjct 3364 AGAATCAGAGCCT-GATCTCCTAGGAGACACGTGGCGTCCTCAAGATCTACCTCGAGAAC 3422 Query 16583 GTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATG 16642 | | || || | || ||| |||||||||||| || || ||||||||| |||| Sbjct 3423 ATCAGCCGAGACGTCGTCACCTACACCGAGCACGCTCGCCGGAACACTGTCACCGTCATG 3482 Query 16643 GATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 || ||||||| || | || || ||||||||| Sbjct 3483 GACGTCGTCTACCCACTCAAGCGCTAAGGCCGTA 3516 >seq25963 Length=7044 Score = 84.2 bits (92), Expect = 3e-12 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||| ||||||||||| || || || | || ||||| | || || | Sbjct 6813 GAGACAACATCCAAGGCATCACCAAGCCGGCCATTCGCAGGCTTGCTCGCAGAGGAGGCG 6872 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||||| || || | |||| ||||||| | | || | ||||| ||| | Sbjct 6873 TGAAGCGAATCAGCGGTCTCATCTACGAAGAGACCAGAGGAGTCCTCAAGATATTCTTGG 6932 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | || |||| || || || || ||||||||||| | | ||||| |||||| Sbjct 6933 AAAATGTCATCCGCGACGCCGTCACTTACACCGAGCACGCCAGGAGGAAGACCGTCACCG 6992 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 ||||||| |||| || || | || | || ||||||| Sbjct 6993 CCATGGACGTCGTTTACGCGCTCAAGAGGCAGGGCCGTA 7031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78713111570325