Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq265020 104 3e-17 seq237122 98.7 1e-15 >seq265020 Length=820 Score = 104 bits (114), Expect = 3e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||||||||||||||| || ||||||| || || |||||||| || |||||| Sbjct 176 CAGGCGAAATCGCAGTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGT 117 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| ||||| || || || ||||| || |||| ||| ||| || |||||| Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAG 57 Query 33424 ATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTC 33458 || ||||| || ||| || ||||| || || | ||| Sbjct 56 ATCCCTTCGAC-GCAGGCGAAGGCGATCAGACGCTC 22 >seq237122 Length=485 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || |||||||||||||| ||||||| || || |||||||| || |||||| Sbjct 176 CAAGCAAAGTCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGT 117 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| ||||| || || || ||||| || |||| ||| ||| || |||||| Sbjct 116 CCCGGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAG 57 Query 33424 ATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTC 33458 || ||||| || ||| || ||||| || || | ||| Sbjct 56 ATCCCTTCGAC-GCAGGCGAAGGCGATCAGACGCTC 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619863416689000