Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq86164 105 6e-18 seq355996 86.0 5e-12 seq148231 86.0 5e-12 >seq86164 Length=2128 Score = 105 bits (116), Expect = 6e-18 Identities = 155/218 (71%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 23983 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042 |||||| | |||| | ||||| ||||| | || ||||| | || ||| |||| || | Sbjct 339 CAAACAGA-TGCAGATCTTTGTGAAAACTCTTACCGGAAAGACCATCACCCTCGAGGTGG 281 Query 24043 AGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 | | ||||||||||| | |||||| ||||| ||||| || || || || | Sbjct 280 AAAGCTCTGACACCATCGACAATGTCAAAGCTAAGATCCAAGACAAGGAGGGTATTCCCC 221 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG 24162 | || || ||||| ||||| | || ||||||||| ||||| || | | ||| | | | Sbjct 220 CAGACCAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTTGCTG 161 Query 24163 ATTATAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 |||| ||||||||||| || ||||| | ||||| ||| Sbjct 160 ATTACAACATTCAAAAGGAGTCTACGCTCCATTTGGTG 123 >seq355996 Length=1690 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| | || || || | || ||| | || ||||| || | Sbjct 1123 ATGCAGATCTTCGTGAAAACCCTTACGGGTAAGACCATAACCCTAGAGGTCGAATCCTCC 1064 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| ||||| ||||| || |||||||| || Sbjct 1063 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCTCCCGACCAG 1004 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| ||||| || | | ||| || ||| || ||| Sbjct 1003 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACGCTCGCCGACTACAAC 944 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 943 ATCCAGAAGGAGTCGAC 927 >seq148231 Length=1271 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || ||||| |||| || || | || || |||| |||||| | Sbjct 6 AACATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCATAACTCTCGAGGTCGAGAGC 65 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | ||||| ||||| ||||| ||||| || ||||| || Sbjct 66 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCTGAC 125 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || || | ||||| | || ||| || || |||||||| | | ||| | | ||| || Sbjct 126 CAGCAACGCCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGAACCCTAGCCGACTAC 185 Query 24168 AACATTCAAAAAGAATCTACAATTCAT 24194 ||||| || || || || || ||||| Sbjct 186 AACATCCAGAAGGAGTCGACGCTTCAT 212 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | || ||||| |||| || |||| || ||| | Sbjct 465 ATGCAGATCTTTGTGAAAACCCTCACGGGAAAGACGATCACGCTCGAGGTGGAGAGTTCC 524 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 525 GACACCATCGACAACGTGAAGGCTAAGATCCAAGACAAGGAAGGTATTCCACCGGACCAG 584 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | || || || ||||| ||||| | | ||| | || |||||| ||| Sbjct 585 CAGAGGCTGATCTTCGCTGGGAAACAACTTGAAGACGGCCGAACCCTCGCCGATTACAAC 644 Query 24171 ATTCAAAAAGA 24181 || || || || Sbjct 645 ATCCAGAAGGA 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427860890383875