Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq380537 87.8 2e-12 seq274579 86.0 5e-12 >seq380537 Length=500 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||||||||| |||| ||||||||| ||| | |||| ||| || || ||||| ||| Sbjct 356 GATAAAGAAGGAATCCCTCCTGATCAGCAGAGATTGATTTTTGCTGGGAAGCAATTGGAA 297 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | || | || ||||| ||||| ||||| ||||| || | ||| |||| ||| Sbjct 296 GATGGGAGGACTCTTGCGGATTACAACATCCAAAAGGAGTCGACGCTTCATCTGGTTTTG 237 Query 115499 AGATTGCGAGGAGGAA 115514 || || | || |||| Sbjct 236 AGGCTGAGGGGGGGAA 221 >seq274579 Length=631 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||||||||| |||| ||||||||| | | |||| ||| || || ||||| ||| Sbjct 487 GATAAAGAAGGAATCCCTCCTGATCAGCAGACGTTGATTTTTGCTGGGAAGCAATTGGAA 428 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | || || || ||||| ||||| ||||| ||||| || || ||| |||| ||| Sbjct 427 GATGGGAGGACAATTGCGGATTACAACATCCAAAAGGAGTCGACAATTCATCTGGTTTTG 368 Query 115499 AG 115500 || Sbjct 367 AG 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423291053923000