Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq65596 104 2e-17 seq86164 102 7e-17 seq33053 102 7e-17 seq208788 95.1 1e-14 seq148231 93.3 3e-14 seq154533 91.5 1e-13 seq107409 89.7 4e-13 seq15585 84.2 2e-11 seq5063 84.2 2e-11 seq355996 82.4 6e-11 >seq65596 Length=1444 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| || |||||||| || || || || || |||| || | | ||||| | || Sbjct 389 TGCAGGGTAGACTCCTTCTGGATATTATAATCCGCCAGAGTCCTCCCATCCTCAAGCTGC 330 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850 || || ||| | ||||||| ||| ||||| ||| | |||||||||||| || ||| Sbjct 329 TTACCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGAATGCCCTCTTTGTCCTGAATCTTT 270 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | ||||| | ||| |||| |||||| || || |||| Sbjct 269 GC--CTTCACATTGTCAATGGTGTCTGAGCTCTCAACCTCCAAGGTGATTGTCTTCCCGG 212 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||||||||||||||| Sbjct 211 TCAGGGTCTTGACAAAAATCTGCAT 187 >seq86164 Length=2128 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| ||||| ||||||||||| |||||||| || || | |||| | ||||| Sbjct 121 AGCACCAAATGGAGCGTAGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCGGCCGTCC 180 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || |||| ||| ||||| || | ||||| ||||| Sbjct 181 TCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 240 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | | ||||| | ||| || | |||||||| Sbjct 241 TGGATCTTAGCT--TTGACATTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGG 298 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | |||||||| || ||||| ||||| |||||||| Sbjct 299 TCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 332 >seq33053 Length=1800 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || |||| || ||||| |||||||| || |||||||||||||| Sbjct 1566 CCTCCCCTCAGCCTGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCT 1507 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | ||||||| | ||||| || || | || || ||||| ||||| ||| Sbjct 1506 AGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 1447 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || ||| || | | | | |||||| || ||| Sbjct 1446 ATTCCTTCCTTGTCCTGGATCTTGGC--CTTGACATTGTCGATTGTGTCGGAGGACTCGA 1389 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||| ||||| || || || || ||||| || || |||||||| Sbjct 1388 CCTCTAGGGTTATGGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCAT 1340 >seq208788 Length=2051 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||||||||| || |||||||| || |||| || | | ||| Sbjct 1682 AGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCC 1623 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || || |||||| | || |||| ||| ||||| || | |||||| ||||| Sbjct 1622 TCCAGCTGCTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 1563 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC--TCCGTTTCCACGGTGAT 16899 || ||||| |||||| | | | ||||| ||| || ||| |||| ||||| Sbjct 1562 TGAATCTTTGC--CTTCACATTATCAATAGTGT--CCGAGCTTTCCACCTCCAAAGTGAT 1507 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || || |||| || || ||||| |||||||| Sbjct 1506 GGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 1471 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||| || || | ||| | ||||||| | ||| Sbjct 1445 TGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGCAAGGGTCCTTCCGTCCTCAAGTTGC 1386 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || |||| |||| ||| ||||| || | ||||| ||||| ||| | Sbjct 1385 TTCCCGGCGAAAATCAGCCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCTTGAATCTTT 1326 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||| |||| || | ||||||||| ||||| || Sbjct 1325 GTCTTCACATTATCAATTGTGTCTGAACTCTCCACCTCGAGGGTGATGGTCTTTCCTGTA 1266 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || |||||||||||||||||| Sbjct 1265 AGGGTCTTGACAAAAATCTGCATT 1242 >seq148231 Length=1271 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| ||| ||||| |||||||| || |||||||||||||| | |||| | |||| Sbjct 220 AGTACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCT 161 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||||| || || | || || || || ||||| ||| | || || ||||| Sbjct 160 TCGAGCTGTTTTCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATTCCTTCCTTGTCC 101 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | |||||| | ||| || | || |||| Sbjct 100 TGGATCTTGGC--CTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTTATGG 43 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || ||||| || |||||||| || |||||||| || Sbjct 42 TCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTT 6 >seq154533 Length=826 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| || |||||||| || || ||||| || |||| || | | ||||| | || Sbjct 389 TGCAGGGTAGACTCCTTCTGGATATTGTAATCCGCCAGAGTCCTCCCATCCTCGAGCTGC 330 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| ||||||| | ||| ||||| ||| | |||||| ||||| ||| | Sbjct 329 TTACCAGCAAAAATAAGTCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTT 270 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | ||||| | ||| |||| |||||| || || || ||| Sbjct 269 GACTTCACATTGTCAATGGTGTCTGAGCTCTCGACCTCCAAGGTGATCGTCTTGCCAGTC 210 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || |||||||||||||| Sbjct 209 AGGGTCTTCACAAAAATCTGCAT 187 >seq107409 Length=3443 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||||||||| || |||||||| || |||| || | | ||| Sbjct 1297 AGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCC 1356 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || || || ||| | || |||| ||| ||||| || | |||||| ||||| Sbjct 1357 TCCAGCTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 1416 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| ||| || | | | |||||| | |||| |||| |||||||| Sbjct 1417 TGAATTTTTGCCTTGACATTATCAATAGTGTCCGAGCTCTCCACCTCCAAAGTGATGGTC 1476 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||| || || ||||| |||||||| Sbjct 1477 TTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 1508 >seq15585 Length=2740 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| |||||||||||||| || |||||||||||||| | |||| | |||| Sbjct 220 AGAACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCT 161 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||||| || || | || | || || |||||| || | || || ||||| Sbjct 160 TCAAGCTGTTTTCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGGAATTCCTTCCTTGTCC 101 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | |||||| | ||| || | || |||| Sbjct 100 TGGATCTTGGC--CTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTTATGG 43 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || ||||| || |||||||| || |||||||| || Sbjct 42 TCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTT 6 >seq5063 Length=5799 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | ||| || ||| |||||| || |||||||| || || Sbjct 432 CCTCCACGAAGGCGGAGCACAAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCG 373 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||| || || || || || | || || ||||| |||||| || Sbjct 372 AGGGTGCGACCGTCCTCTAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 313 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || ||| || | | | | |||||| | ||| Sbjct 312 ATCCCTTCCTTGTCCTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCGGAGCTCTCGA 255 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || ||||| || ||||||||||| |||||||| Sbjct 254 CCTCCAAAGTGATGGTCTTGCCGGTTAGAGTTTTGACAAAGATCTGCAT 206 >seq355996 Length=1690 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| | ||||||| | || Sbjct 921 TGTAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTTCGGCCGTCCTCGAGCTGC 980 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | || || ||||| || | | Sbjct 981 TTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTC 1040 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | |||||| || || || | ||| ||||| || || || Sbjct 1041 GCCTTCACATTGTCGATGGTGTCGGAGGATTCGACCTCTAGGGTTATGGTCTTACCCGTA 1100 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || |||||||| Sbjct 1101 AGGGTTTTCACGAAGATCTGCAT 1123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403132820614750