Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq86915 95.1 1e-14 seq139832 91.5 2e-13 seq312365 89.7 6e-13 seq2887 87.8 2e-12 seq293017 86.0 7e-12 seq244512 84.2 2e-11 seq237122 84.2 2e-11 seq172088 84.2 2e-11 seq81367 84.2 2e-11 >seq86915 Length=1173 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/99 (83%), Gaps = 7/99 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 301 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 358 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGG 126359 |||||||||| || ||||| ||||||| ||||| |||| Sbjct 359 GCGTGGGTTCAAATCCCACTTCTGACAACTTATT-TTGG 396 >seq139832 Length=1075 Score = 91.5 bits (100), Expect = 2e-13 Identities = 82/102 (80%), Gaps = 11/102 (11%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 369 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 312 Query 126322 CGTGGGTTCGAACCCCACACCTGA-----CAAATTATTATTG 126358 ||||||||| || ||||| |||| ||||||||||||| Sbjct 311 CGTGGGTTCAAATCCCACTTCTGACATTGCAAATTATTATTG 270 >seq312365 Length=542 Score = 89.7 bits (98), Expect = 6e-13 Identities = 74/89 (83%), Gaps = 6/89 (7%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA-- 126320 ||||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 308 ACAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGA 251 Query 126321 --GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 250 GGGCGTGGGTTCAAATCCCACTTCTGACA 222 >seq2887 Length=7928 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 6885 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 6828 Query 126328 TTCGAACCCCACACCTGACAAATTAT--TATTGGAATTTTT 126366 ||| || |||||| ||| ||| ||| | || |||||||| Sbjct 6827 TTCAAATCCCACAGCTGTCAATCTATAATTTTAGAATTTTT 6787 >seq293017 Length=1292 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 241 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 298 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 299 GCGTGGGTTCAAATCCCACTTCTGACA 325 >seq244512 Length=481 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 398 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 455 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 456 CGTGGGTTCAAATCCCACTTCTGACA 481 >seq237122 Length=485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 118/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||| || | ||||||||||||||| |||| ||| ||| ||| || | Sbjct 177 GCAAGCAAAGTCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAG 118 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTACCAGaaaaaa 93209 || || | || ||||||||||||||||| || | || ||| || || || || || | Sbjct 117 TCCCGGCATGAGGCCTCGTTTCTTGAGCCAGAA-AATGGCGCAGAAGCTTCCGGAGAAGA 59 Query 93210 aTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 | || ||||| ||| || || || | | ||| ||||| || Sbjct 58 AGATCCCTTCGACGCAGGCGAAGGCGATCAGACGCTCGGCGAA 16 >seq172088 Length=3088 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 1270 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 1213 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 1212 CGTGGGTTCAAATCCCACTTCTGACA 1187 >seq81367 Length=1439 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 979 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 922 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 921 CGTGGGTTCAAATCCCACTTCTGACA 896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554104165021000