Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq200892 136 8e-27 seq388548 132 1e-25 seq226677 113 9e-20 seq374839 93.3 9e-14 seq244339 93.3 9e-14 seq115563 93.3 9e-14 seq44042 93.3 9e-14 seq36536 93.3 9e-14 seq10584 93.3 9e-14 seq5481 93.3 9e-14 seq5438 93.3 9e-14 seq380573 91.5 3e-13 seq316697 91.5 3e-13 seq116342 91.5 3e-13 >seq200892 Length=7226 Score = 136 bits (150), Expect = 8e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 218582 TGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACC 218641 |||| |||||||| ||||| || | |||||||| || | |||||| ||||| Sbjct 148 TGGTTGATGGCCTTAAGCCTGGTCAAAGGAAGATCCTGTTCTGTTCTTTCAAGAGGAACT 207 Query 218642 TGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACC 218701 | ||| ||||| |||||||||||||||||||||||||| || ||| ||| | ||||| Sbjct 208 TTGTTAAAGAAGCAAAGGTCGCTCAGTTTTCTGGTTATGTTTCTGAACATTCAGCCTACC 267 Query 218702 ATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCA 218761 | || |||||||||||||| || | || | || |||||||| || ||||| || | Sbjct 268 ACCATGGTGAGCAGAGTCTCGCTAGTACTATCATTGGAATGGCACAAGATTATGTCGGTA 327 Query 218762 GTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGG 218801 | ||||| || || | || | || || || |||||||| Sbjct 328 GCAACAATATTAATCTTCTCATGCCAAATGGCCAGTTTGG 367 >seq388548 Length=2643 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 218611 AAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTT 218670 |||||||| || | |||||| ||||| | ||| ||||| ||||||||||||||| Sbjct 16 AAGATCCTGTTCTGTTCTTTCAAGAGGAACTTTGTTAAAGAAGCAAAGGTCGCTCAGTTT 75 Query 218671 TCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCC 218730 ||||||||||| || ||| ||| | |||||| || |||||||||||||| || | Sbjct 76 TCTGGTTATGTTTCTGAACATTCAGCCTACCACCATGGTGAGCAGAGTCTCGCTAGTACT 135 Query 218731 ATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAAC 218790 || | || ||||| ||||| ||||| ||||| ||||| || || | || | || ||| Sbjct 136 ATCATTGGAATGGCGCAGGATTATGTAGGCAGCAACAATATTAATCTTCTCATGCCAAAC 195 Query 218791 GGTCAGTTTGG 218801 || |||||||| Sbjct 196 GGCCAGTTTGG 206 >seq226677 Length=1585 Score = 113 bits (124), Expect = 9e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 218569 TCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCA 218628 |||||||| |||| |||||||| ||||| || | |||||||| || | Sbjct 1410 TCTATTCCTTCAATGGTTGATGGCCTAAAGCCTGGTCAAAGGAAGATCCTGTTCTGTTCT 1469 Query 218629 TTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAA 218688 |||||| ||||| | ||| ||||| |||||||||||||||||||||||||| || ||| Sbjct 1470 TTCAAGAGGAACTTTGTTAAAGAAGCAAAGGTCGCTCAGTTTTCTGGTTATGTTTCTGAA 1529 Query 218689 ATTTCTGGCTACCATCACGGTGAGCAGAGTCT 218720 ||| | |||||| || |||||||||||||| Sbjct 1530 CATTCAGCCTACCACCATGGTGAGCAGAGTCT 1561 >seq374839 Length=7001 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 602 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 661 Query 142563 CCCCAC 142568 |||||| Sbjct 662 CCCCAC 667 >seq244339 Length=678 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 74 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 15 Query 142563 CCCCAC 142568 |||||| Sbjct 14 CCCCAC 9 >seq115563 Length=5263 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 4764 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 4705 Query 142563 CCCCAC 142568 |||||| Sbjct 4704 CCCCAC 4699 >seq44042 Length=1924 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 1512 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1571 Query 142563 CCCCAC 142568 |||||| Sbjct 1572 CCCCAC 1577 >seq36536 Length=4820 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 1630 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1689 Query 142563 CCCCAC 142568 |||||| Sbjct 1690 CCCCAC 1695 >seq10584 Length=5118 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 3969 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 3910 Query 142563 CCCCAC 142568 |||||| Sbjct 3909 CCCCAC 3904 >seq5481 Length=4346 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 657 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 716 Query 142563 CCCCAC 142568 |||||| Sbjct 717 CCCCAC 722 >seq5438 Length=2334 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 1757 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1816 Query 142563 CCCCAC 142568 |||||| Sbjct 1817 CCCCAC 1822 >seq380573 Length=793 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 1 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 60 Query 142564 CCCAC 142568 ||||| Sbjct 61 CCCAC 65 >seq316697 Length=270 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 1 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 60 Query 142564 CCCAC 142568 ||||| Sbjct 61 CCCAC 65 >seq116342 Length=5070 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 207 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 148 Query 142564 CCCAC 142568 ||||| Sbjct 147 CCCAC 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1022621483807025