Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq154533 113 4e-20 seq65596 113 4e-20 seq86164 104 2e-17 seq5063 104 2e-17 seq208788 100 2e-16 seq107409 100 2e-16 seq230935 95.1 1e-14 seq148231 93.3 4e-14 seq302927 89.7 4e-13 seq314259 84.2 2e-11 >seq154533 Length=826 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || || |||||||| || ||| | ||| || || || |||||| Sbjct 383 GTAGACTCCTTCTGGATATTGTAATCCGCCAGAGTCCTCCCATCCTCGAGCTGCTTACCA 324 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| ||||| ||||||||||| || ||||| ||||||| || Sbjct 323 GCAAAAATAAGTCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGACTTC 264 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | ||||| |||| ||| | ||| ||||| ||||| || Sbjct 263 ACATTGTCAATGGTGTCTGAGCTCTCGACCTCCAAGGTGATCGTCTTGCCAGTCAGGGTC 204 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 203 TTCACAAAAATCTGCAT 187 >seq65596 Length=1444 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || || || ||||| || ||| | ||| ||||| || |||||| Sbjct 383 GTAGACTCCTTCTGGATATTATAATCCGCCAGAGTCCTCCCATCCTCAAGCTGCTTACCA 324 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| ||||||||||| |||||||| ||||||| || Sbjct 323 GCAAAGATAAGCCTCTGCTGGTCTGGAGGAATGCCCTCTTTGTCCTGAATCTTTGCCTTC 264 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | || || |||| ||| | || || |||||||| || Sbjct 263 ACATTGTCAATGGTGTCTGAGCTCTCAACCTCCAAGGTGATTGTCTTCCCGGTCAGGGTC 204 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 203 TTGACAAAAATCTGCAT 187 >seq86164 Length=2128 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | |||||| || ||||||||||||||||| Sbjct 103 ATACCACCACGGAGGCGAAGCACCAAATGGAGCGTAGACTCCTTTTGAATGTTGTAATCA 162 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || || ||| |||| || | ||| ||||| || Sbjct 163 GCAAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGG 222 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| ||| | | || | |||||| | | ||| Sbjct 223 GGAATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTGTCGATGGTGTCAGAGCTTTCC 282 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||| |||||||| ||||| |||||||| Sbjct 283 ACCTCGAGGGTGATGGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 332 >seq5063 Length=5799 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || ||||||||||| | || ||| || || | || || |||||| || Sbjct 396 TCCTTCTGGATGTTGTAATCAGCGAGGGTGCGACCGTCCTCTAACTGCTTTCCAGCGAAG 337 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || |||||||| |||||||| ||||| ||||| ||||| ||||| || | | Sbjct 336 ATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 277 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||||| | ||||| |||| || | || |||||||| |||||||| ||| Sbjct 276 TCGATGGTGTCGGAGCTCTCGACCTCCAAAGTGATGGTCTTGCCGGTTAGAGTTTTGACA 217 Query 114372 AAAATCTGCATG 114383 || ||||||||| Sbjct 216 AAGATCTGCATG 205 >seq208788 Length=2051 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| ||||||| || ||||| ||||||||||| || || Sbjct 788 ATACCACCACGGAGACGGAGAACCAAATGTAGGGTCGATTCCTTTTGAATGTTATAGTCA 729 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| || ||||| || || || || |||| || | ||| ||||| || Sbjct 728 GCAAGAGTACGGCCGTCCTCAAGCTGCTTTCCCGCAAAGATTAGCCTCTGCTGGTCTGGT 669 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| || || ||||| ||| | | |||| ||||| | | |||| Sbjct 668 GGGATGCCTTCCTTCTCCTGGATCTTAGTTTTGACATTGTCAATTGTGTCTGAGCTTTCG 609 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || |||| || || |||||||||||||| Sbjct 608 ACCTCAAGAGTAATGGTCTTTCCCGTCAATGTCTTCACAAAAATCTGCAT 559 >seq107409 Length=3443 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| ||||||| || ||||| ||||| ||||| || || Sbjct 2191 ATGCCACCACGAAGACGGAGAACCAAATGTAAGGTCGATTCCTTTTGGATGTTATAGTCA 2250 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| ||| ||||| || || ||||| | || || | ||| ||||| || Sbjct 2251 GCGAGAGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAGCCTCTGCTGGTCTGGT 2310 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||| ||| | | |||| ||||| | | ||| Sbjct 2311 GGGATGCCTTCCTTGTCCTGGATCTTAGCTTTGACATTGTCAATTGTGTCTGAGCTTTCA 2370 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || |||| || || |||||||||||||| Sbjct 2371 ACCTCAAGGGTAATAGTCTTTCCCGTCAAGGTCTTCACAAAAATCTGCAT 2420 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || ||||| || || |||||| ||||||| | ||| || || || ||||||||||| ||| Sbjct 2038 TCCTCAAGCTGCTTTCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATGCCTTCCTTG 2097 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || |||||| |||| | |||| ||||| | | ||| || || | ||| | Sbjct 2098 TCCTGAATCTTAGCCTTTACGTTGTCAATTGTGTCAGAGCTTTCAACCTCAAGGGTTATG 2157 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || ||||| || ||||| || |||||||| |||||| Sbjct 2158 GTCTTGCCCGTAAGAGTCTTAACAAAAATTTGCATG 2193 >seq230935 Length=680 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || |||||||| || | | || ||||| | || |||||||| || ||||||||||| Sbjct 169 ATCCCGCCACGGAGACGGAGCACCAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCA 228 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | || ||||| || || || || | || || | ||| ||||| || Sbjct 229 GCAAGGGTTCTGCCGTCCTCAAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGGTCTGGG 288 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | |||| |||||| | | ||| Sbjct 289 GGAATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAATGGTGTCAGAGCTTTCA 348 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || ||||||| || || |||||||||||||| Sbjct 349 ACCTCCAAGGTAATGGTCTTTCCGGTCAAGGTCTTAACAAAAATCTGCAT 398 >seq148231 Length=1271 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||||||| | || || |||||||||||||| |||||| || Sbjct 655 TCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCGTCTTCAAGTTGTTTCCCAGCGAAG 596 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || | ||| |||||||| ||||| ||||| ||||| ||||| || | | Sbjct 595 ATCAGCCTCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTTG 536 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||||| || || || | || | ||| || || || || ||||| ||| Sbjct 535 TCGATGGTGTCGGAACTCTCCACCTCGAGCGTGATCGTCTTTCCCGTGAGGGTTTTCACA 476 Query 114372 AAAATCTGCAT 114382 || |||||||| Sbjct 475 AAGATCTGCAT 465 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || |||||||| | | || ||||| | || || || || |||||||||||| Sbjct 922 ATCCCTCCACGTAGACGGAGGACCAAATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCG 863 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| || || | || || || ||| |||| || | ||| |||||||| Sbjct 862 GCCAAGGTACGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGG 803 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| || | | || | |||||| | ||| Sbjct 802 GGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCTATGGTGTCCGAACTCTCG 743 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| || ||||| ||||| |||||||| Sbjct 742 ACTTCTAGGGTAATGGTCTTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 693 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| || | || ||| || || || || || || || || Sbjct 1111 TCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCCTCCAGCTGCTTTCCGGCAAAG 1052 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || |||||||| |||||||| ||||| ||||| ||||| ||||| || | | Sbjct 1051 ATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTG 992 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| || || | | ||||| |||| || | || |||||||| || ||||| ||| Sbjct 991 TCAATTGTATCCGAGCTCTCGACCTCCAAAGTAATTGTCTTGCCGGTGAGGGTTTTCACA 932 Query 114372 AAAATCTGCAT 114382 ||||||||||| Sbjct 931 AAAATCTGCAT 921 >seq302927 Length=390 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| ||||| | || |||||||| ||||||||||||||| Sbjct 224 ATCCCACCACGGAGACGGAGAACCAAATGAAGGGTCGATTCTTTCTGAATGTTGTAATCG 165 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | || || || || || |||||| | || || | ||| ||||| || Sbjct 164 GCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCTGGG 105 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| |||||| |||| | |||| |||||| | | ||| Sbjct 104 GGGATGCCCTCCTTGTCTTGAATCTTGGCCTTTACATTGTCAATGGTGTCAGAGCTTTCA 45 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAAT 114376 || |||| || | || || || || || || || |||||||| Sbjct 44 ACCTCCAACGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAAAT 1 >seq314259 Length=830 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| || | || ||| || || || || || || || || Sbjct 344 TCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCCTCCAGCTGCTTTCCGGCAAAG 285 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || |||||||| |||||||| ||||| ||||| ||||| ||||| || | | Sbjct 284 ATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTG 225 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| || || | | ||||| |||| || | || |||||||| || ||||| ||| Sbjct 224 TCAATTGTATCCGAGCTCTCGACCTCCAAAGTAATTGTCTTGCCGGTGAGGGTTTTCACA 165 Query 114372 AAAATCTGCAT 114382 ||||||||||| Sbjct 164 AAAATCTGCAT 154 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 114219 GTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATG 114278 || ||| ||| || | || || || || ||||||||||||| |||||||| ||||| Sbjct 545 GTGCGACCATCCTCCAACTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGAATC 486 Query 114279 CCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCC 114338 || || ||||| ||||| || | | |||| |||||| | | ||||| ||| Sbjct 485 CCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTCTCGACCTCC 426 Query 114339 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||| | ||| |||||||| || || || || || |||||||| Sbjct 425 AGGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418106598342300