Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq265020 165 2e-35 seq237122 165 2e-35 seq97145 159 7e-34 seq167436 149 1e-30 >seq265020 Length=820 Score = 165 bits (182), Expect = 2e-35 Identities = 313/455 (69%), Gaps = 7/455 (2%) Strand=Plus/Plus Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| |||| | ||| | ||||| || |||||| || ||||||||||| || |||| Sbjct 16 TTCGCCGAGCGTCTGATCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGAAGCTTC 75 Query 42753 GCCTCCATCTTCTGGCTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 | |||| |||||||||||| | ||| || ||||| |||||||||||||| ||||| Sbjct 76 TGCGCCATTTTCTGGCTCAAGAAACGAGGCCTC-ATGCCGGGACTCACCTTCTCCAACGA 134 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 || ||| | ||||| || ||||| | || || |||||||| || | |||| | Sbjct 135 GCTGATCTCGCGAGACGAAGGCCTGCACTGCGATTTCGCCTGCCTTCTTTACTCG---CT 191 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 || ||| | |||| ||||||| ||| ||| ||| || || || |||||||| Sbjct 192 TCTGAGGAAGAAGCTGAGCGAGGAGCGAGTCAAGGCTATCGTCCGCGACGCGGTGGAGAT 251 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGACC 42990 ||||| |||||| | | |||| || ||| | ||||||| |||||| || | Sbjct 252 CGAGAGGGAGTTTGTGTGCGACGCGCTACCATGTG-CGTTGGTCGGGATGAACGGCGCCT 310 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCC 43050 | ||| | | |||||| ||| ||||||||||| || || | | | || | | Sbjct 311 TGATGAGTCAATACATCGAGTTCGTCGCCGACCGGCTGTTGGGTGCGCTAGGGTACGGGA 370 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 | ||| | | ||| || || | |||||| ||||||||| |||| |||| Sbjct 371 AGGTGTACGGTGTTCAGAACCCGTTTGATTGGATGGAGCTGATCTCGTTGCAGGGGAAGA 430 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||| ||||||||| | |||| || |||||| Sbjct 431 CCAACTTCTTCGAGAAGAGGGTCGGGGAGTACCAG 465 >seq237122 Length=485 Score = 165 bits (182), Expect = 2e-35 Identities = 313/455 (69%), Gaps = 7/455 (2%) Strand=Plus/Plus Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| |||| | ||| | ||||| || |||||| || ||||||||||| || |||| Sbjct 16 TTCGCCGAGCGTCTGATCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGAAGCTTC 75 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 | |||| |||||||||||| | ||| || ||||| |||||||||||||| ||||| Sbjct 76 TGCGCCATTTTCTGGCTCAAGAAACGAGGCCTC-ATGCCGGGACTCACCTTCTCCAACGA 134 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 || ||| | ||||| || ||||| | |||||||| ||||| || | ||| || Sbjct 135 GCTGATCTCACGAGACGAAGGTCTGCACTGCGACTTTGCTTGCCTGCTTTACTC---CCT 191 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 ||| || | |||| ||||||| ||| ||| ||| | || || |||||||| Sbjct 192 CCTGAGAAAGAAGCTGAGCGAGGAGCGAGTCAAGGCGATCGTTCGCGACGCGGTGGAGAT 251 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACC 42990 ||||| |||||| || | ||||| ||||| | ||||||| |||||| | Sbjct 252 CGAGAGGGAGTTTGTCTGCGACGCGCTG-CCGTGCGCGTTGGTCGGGATGAACGGTGCGT 310 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCC 43050 | ||| || |||||||| ||| ||| ||||| | || || | | | || | | Sbjct 311 TGATGAGCCAGTACATCGAGTTCGTTGCCGATCGGCTGTTGCGAGCGCTAGGGTACGGGA 370 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 | || | | ||| || || | |||||| ||||||||| |||| |||| Sbjct 371 AGGTATATGGTGTTCAGAACCCGTTTGATTGGATGGAGCTGATCTCGTTGCAGGGGAAGA 430 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||| ||||||||||| |||| || |||||| Sbjct 431 CCAACTTCTTCGAGAAGCGGGTCGGGGAGTACCAG 465 >seq97145 Length=990 Score = 159 bits (176), Expect = 7e-34 Identities = 244/345 (71%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || ||| || |||||| ||||||||||| || || |||| |||||||||| Sbjct 344 ATCCAGTACCCAGAAATCTGGGAAATGTACAAGAAAGCCGAGGCCTCCTTCTGGACCGCC 285 Query 42345 GAGGAGATTGACCTGGCCAAGGACACG-GCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||| | ||||| || |||| | ||| | | | || | ||| | | |||| || Sbjct 284 GAGGAAGTGGACCTCTCCCAGGATATTCGCCAGTTTGAAGCC-CTGACCCACGACGAGAA 226 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 | ||| ||| || | || ||||||||||||||||| ||||| || || ||||| Sbjct 225 GCACTTCATCAGCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGAATCGTACTCGAGAA 166 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 ||| ||| ||||||||||| ||||| || | ||||||||| |||||||||||| Sbjct 165 CCTCGCCGGGAGGTTCATGAAGGAGGTTCAAGTCGCGGAGGCGCGCGCCTTCTACGGCTT 106 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACAT 42583 |||||| ||||| |||||| | ||||| ||| ||||| | || || | |||| || Sbjct 105 CCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGTCGTATAT 46 Query 42584 CCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628 | ||| ||| |||| | | | || ||| | ||||| || || Sbjct 45 CAAGGACTCCGCCGAGAAGACCCGCCTCTTCCACGCCATCGACAC 1 >seq167436 Length=640 Score = 149 bits (164), Expect = 1e-30 Identities = 256/369 (69%), Gaps = 2/369 (1%) Strand=Plus/Minus Query 42297 GACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGAC 42356 || |||||| ||||||||||| || || ||| ||||||||||||||| | || Sbjct 368 GAAATCTGGGAAATGTACAAGAAAGCCGAGGCCTCTTTCTGGACCGCCGAGGAAGTCGAT 309 Query 42357 CTGGCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAA 42415 || | |||||| | | | | | | || | || | |||| ||| ||| ||| Sbjct 308 CTTTCTCAGGACATCCGTCAGTTCGAAGCC-CTAACCCCCGACGAGAAGCACTTCATCAC 250 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 | | || ||||| ||||||||||| |||||||| ||| |||||||| ||| || Sbjct 249 CCATGTCCTCGCCTTTTTCGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGGGAG 190 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||||||||| ||||| || | ||||||||| |||||||||||||||||| | ||| Sbjct 189 GTTCATGAAGGAGGTTCAAGTCGCGGAGGCGCGCGCCTTCTACGGCTTCCAGATCGGCAT 130 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||||| | || || | |||||||| ||| ||| Sbjct 129 TGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGTCGTACATCAAGGACTCCGC 70 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 |||| | | | || || | ||||| || || | || ||| || ||||||||| | Sbjct 69 CGAGAAGACCCGCCTCTTTCACGCCATCGACACCGTCCCTTGCGTCGCGAAGAAGGCCCA 10 Query 42656 CTGGGCGCT 42664 ||||| || Sbjct 9 GTGGGCCCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 939664425854000