Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq265020 114 3e-20 seq237122 100 6e-16 >seq265020 Length=820 Score = 114 bits (126), Expect = 3e-20 Identities = 300/454 (66%), Gaps = 4/454 (1%) Strand=Plus/Plus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345 || || || |||||||| |||||| | ||||| ||||| || | || ||||| || Sbjct 13 TCCTTCGCCGAGCGTCTGATCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGAAGC 72 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 ||||||||||| || ||||| ||| ||| | ||||| || ||| | || ||| Sbjct 73 TTCTGCGCCATTTTCTGGCTCAAGAAACGAGGCCTCATGCCGGGACTCACCTTCTCCAAC 132 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| | ||| || ||||| ||||| ||| | |||| ||| | || || Sbjct 133 GAGCTGATCTCGCGAGACGAAGGCCTGCACTGCGATTTCGCCTGCCTTCTTTACTCGCTT 192 Query 243466 CTCCAGAACAAGCT-ACCATTCGAAACG-GTCAAACAAATCATCACAGAAGCAGTTGAAA 243523 || ||| ||||| | | | | || ||||| ||| || || || || || | Sbjct 193 CTGAGGAAGAAGCTGAGCGA--GGAGCGAGTCAAGGCTATCGTCCGCGACGCGGTGGAGA 250 Query 243524 ACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAAC 243583 ||| | ||| || | |||||||| | ||||| | | | || |||||| | Sbjct 251 TCGAGAGGGAGTTTGTGTGCGACGCGCTACCATGTGCGTTGGTCGGGATGAACGGCGCCT 310 Query 243584 TCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGA 243643 | ||| | || |||||||| ||||| |||||||| | || ||||| || || | || Sbjct 311 TGATGAGTCAATACATCGAGTTCGTCGCCGACCGGCTGTTGGGTGCGCTAGGGTACGGGA 370 Query 243644 AAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAA 243703 | |||||| ||||||| |||| | |||||||| || ||| | || ||||| | Sbjct 371 AGGTGTACGGTGTTCAGAACCCGTTTGATTGGATGGAGCTGATCTCGTTGCAGGGGAAGA 430 Query 243704 CTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 | ||||||||||| ||| | ||| | || || || Sbjct 431 CCAACTTCTTCGAGAAGAGGGTCGGGGAGTACCA 464 >seq237122 Length=485 Score = 100 bits (110), Expect = 6e-16 Identities = 297/455 (65%), Gaps = 6/455 (1%) Strand=Plus/Plus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345 || || || |||||||| |||||| | ||||| ||||| || | || ||||| || Sbjct 13 TCCTTCGCCGAGCGTCTGATCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGAAGC 72 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 ||||||||||| || ||||| ||| ||| | ||||| || ||| | || ||| Sbjct 73 TTCTGCGCCATTTTCTGGCTCAAGAAACGAGGCCTCATGCCGGGACTCACCTTCTCCAAC 132 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| | ||| || ||||| || || ||| | || | | || | || || Sbjct 133 GAGCTGATCTCACGAGACGAAGGTCTGCACTGCGACTTTGCTTGCCTGCTTTACTCC--- 189 Query 243466 CTCCAGAACAAGCTACCATTCGA--AACG-GTCAAACAAATCATCACAGAAGCAGTTGAA 243522 |||| || ||| | ||| | || ||||| ||| | || || || || Sbjct 190 CTCCTGAGAAAGAAGCTGAGCGAGGAGCGAGTCAAGGCGATCGTTCGCGACGCGGTGGAG 249 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | ||| | ||| || | |||||||| | || ||| | | | || |||||| || Sbjct 250 ATCGAGAGGGAGTTTGTCTGCGACGCGCTGCCGTGCGCGTTGGTCGGGATGAACGGTGCG 309 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 | ||| | ||||||||||| ||||| ||||| || | || ||||| || || | | Sbjct 310 TTGATGAGCCAGTACATCGAGTTCGTTGCCGATCGGCTGTTGCGAGCGCTAGGGTACGGG 369 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || || || ||||||| |||| | |||||||| || ||| | || ||||| Sbjct 370 AAGGTATATGGTGTTCAGAACCCGTTTGATTGGATGGAGCTGATCTCGTTGCAGGGGAAG 429 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || ||||||||||| ||||| ||| | || || || Sbjct 430 ACCAACTTCTTCGAGAAGCGGGTCGGGGAGTACCA 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1097283909333750