Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq395693 87.8 2e-12 seq335763 86.0 7e-12 seq369937 82.4 8e-11 seq299503 82.4 8e-11 >seq395693 Length=58139 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||||| |||||||||| ||||||||||||| |||| | |||||||||| Sbjct 50786 GCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAAT 50845 Query 92675 CCC 92677 ||| Sbjct 50846 CCC 50848 >seq335763 Length=501 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 92616 CGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAATC 92675 ||||||||||||||| |||||||||| ||||||||||||| |||| | ||||||||||| Sbjct 420 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 479 Query 92676 CC 92677 || Sbjct 480 CC 481 >seq369937 Length=448 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||||| |||||||| | |||||||||||||| ||| | |||||||||| Sbjct 121 GCGGGGTAGAGCAGCTTGGTAGCTCACAAGGCTCATAACCTGAAGGTCACGGGTTCAAAT 180 Query 92675 CCC 92677 ||| Sbjct 181 CCC 183 >seq299503 Length=1404 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||||| |||||||||| ||||||| ||||| |||||| | |||||||| Sbjct 483 GCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCAAAACCTTGAGGCCACGAGTTCAAAT 542 Query 92675 CCC 92677 ||| Sbjct 543 CCC 545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 523991573358000