Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq230935 107 1e-18
seq302927 102 6e-17
seq208788 96.9 2e-15
seq107409 95.1 9e-15
seq5063 95.1 9e-15
seq355996 91.5 1e-13
seq248859 89.7 4e-13
seq86164 89.7 4e-13
seq33053 87.8 1e-12
seq148231 84.2 2e-11
>seq230935
Length=680
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || |||||||| || ||||| || |||||||||||| || |||| |||| ||
Sbjct 418 ACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCG 477
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || || || | |||| | ||| ||||| ||||| ||||||||||| |
Sbjct 478 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGA 537
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| ||| ||| | || || || ||| | |||| || || || || ||||| ||
Sbjct 538 ATCTTGGCTTTGACATTATCAATGGTGTCGGAACTTTCAACCTCCAAAGTGATGGTCTTC 597
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || || || ||||| ||||||||
Sbjct 598 CCAGTGAGGGTCTTAACAAAGATTTGCAT 626
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||||||||| || ||||| || ||||||||||| || |||| |||| ||
Sbjct 190 ACCAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGCAAGGGTTCTGCCGTCCTCA 249
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| || | |||| | ||| ||||| ||||| || |||||||| |
Sbjct 250 AGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGA 309
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || ||| | || || || || |||| || || ||||||||||| ||
Sbjct 310 ATCTTGGCCTTGACATTATCAATGGTGTCAGAGCTTTCAACCTCCAAGGTAATGGTCTTT 369
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| |||| || || |||||||| |||||
Sbjct 370 CCGGTCAAGGTCTTAACAAAAATCTGCAT 398
>seq302927
Length=390
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| ||||||||||| || ||||| || |||||||||||| || | || |||| ||
Sbjct 204 AACCAAATGAAGGGTCGATTCTTTCTGAATGTTGTAATCGGCAAGGGTCCTGCCGTCCTC 145
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
| || ||||||||| | |||| | ||| ||||| || || || ||||||||
Sbjct 144 CAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTG 85
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
||| ||| |||||| | || || || || |||| || || || |||||||| ||
Sbjct 84 AATCTTGGCCTTTACATTGTCAATGGTGTCAGAGCTTTCAACCTCCAACGTAATGGTCTT 25
Query 15147 ACCTGTCAGAGTTTTTACAAAAAT 15170
|| || || || || ||||||||
Sbjct 24 TCCAGTGAGGGTCTTCACAAAAAT 1
>seq208788
Length=2051
Score = 96.9 bits (106), Expect = 2e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||||||||| || || || ||||||||||| || | || |||| || | |||
Sbjct 1445 TGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGCAAGGGTCCTTCCGTCCTCAAGTTGC 1386
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| || ||| | |||| | ||| ||||| |||||| || |||||||| ||| ||
Sbjct 1385 TTCCCGGCGAAAATCAGCCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCTTGAATCTTT 1326
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
| || ||| | || || || || | | || || || | ||| ||||| || |||||
Sbjct 1325 GTCTTCACATTATCAATTGTGTCTGAACTCTCCACCTCGAGGGTGATGGTCTTTCCTGTA 1266
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
|| || || |||||||| |||||
Sbjct 1265 AGGGTCTTGACAAAAATCTGCAT 1243
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|||||||||||||| || || ||||| ||||||||||| |||| | | |||| ||
Sbjct 539 ACTAAATGAAGGGTTGATTCCTTTTGGATGTTGTAATCAGCGAGAGTGCGACCGTCCTCA 480
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || || ||| | ||||| | || || || |||||||| ||||||||
Sbjct 479 AGCTGCTTTCCGGCGAAGATCAACCTTTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGG 420
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
||||| || ||| | || || ||||| | || || || | || ||||| ||
Sbjct 419 ATTTTAGCCTTGACATTGTCGATGGTATCCGAGCTCTCGACCTCGAGAGTGATGGTCTTT 360
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAA 15184
|| || || ||||| || || |||||||| | | |||
Sbjct 359 CCAGTAAGGGTTTTCACGAAGATTTGCATCTATCAAA 323
>seq107409
Length=3443
Score = 95.1 bits (104), Expect = 9e-15
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||||||||| || || || ||||||||||| ||| | || | || || | |||
Sbjct 1534 TGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGCAAGAGTCCTTCCATCCTCAAGTTGC 1593
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092
|| |||||| | ||||| | ||| ||||| || || || |||||||| ||| |||
Sbjct 1594 TTCCCAGCGAAAATCAATCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGAATCTTT 1653
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
|| || ||| | || |||||||| | | || || || | || ||||| || |||||
Sbjct 1654 GC-CTTCACATTATCGATAGTATCCGAACTCTCCACCTCAAGAGTGATGGTCTTTCCTGT 1712
Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176
|| || || ||||| || |||||
Sbjct 1713 AAGGGTCTTGACAAATATCTGCAT 1736
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|||||||| || || || || || ||||| || || | ||| |||| || | ||
Sbjct 1990 TGAAGGGTTGATTCCTTCTGGATATTGTAGTCTGCAAGGGTCCTCCCGTCCTCAAGCTGC 2049
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | | ||| || || |||||| ||||||||||| ||| ||
Sbjct 2050 TTTCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGAATCTTA 2109
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
||||| | || || || || |||| || || | ||| ||||| || || ||
Sbjct 2110 GCCTTTACGTTGTCAATTGTGTCAGAGCTTTCAACCTCAAGGGTTATGGTCTTGCCCGTA 2169
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
||||| || ||||||||||||||
Sbjct 2170 AGAGTCTTAACAAAAATTTGCAT 2192
Score = 82.4 bits (90), Expect = 5e-11
Identities = 151/220 (69%), Gaps = 1/220 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||||||||| || || ||||| ||||||||||| |||| | | | || ||
Sbjct 2440 ACCAAATGAAGGGTCGATTCCTTTTGGATGTTGTAATCAGCGAGAGTGCGGCCATCCTCA 2499
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || ||||| | ||||| | || || || ||||| || |||||||| |
Sbjct 2500 AGCTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGGGGAATCCCCTCCTTGTCCTGA 2559
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
||||| || || | || || ||||| |||| || || | || ||||| ||
Sbjct 2560 ATTTTAGCCTTGACGTTGTCGATGGTATCCGAGCTTTCGACCTCAAGAGTGATGGTCTTT 2619
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAA 15187
|| || || ||||| || || |||||||| | | ||||||
Sbjct 2620 CCAGTAAGGGTTTTCACGAAGATTTGCATCTAT-AAATAA 2658
>seq5063
Length=5799
Score = 95.1 bits (104), Expect = 9e-15
Identities = 152/217 (70%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||| || || || || ||||||||||| ||| | | |||| ||||| ||
Sbjct 409 ATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGGGTGCGACCGTCCTCTAACTG 350
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|| |||||| | |||| |||||| ||||| ||||| ||||||||||| || ||
Sbjct 349 CTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTGGATCTT 290
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || || | || || || ||| | || || || || || ||||| || || ||
Sbjct 289 GGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCCAAAGTGATGGTCTTGCCGGT 230
Query 15153 CAGAGTTTTTACAAAAATTTGCAT-ATTTGAAATAAA 15188
|||||||| ||||| || ||||| |||| ||| |||
Sbjct 229 TAGAGTTTTGACAAAGATCTGCATGATTTCAAAGAAA 193
>seq355996
Length=1690
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| ||||| || || || || |||||||| ||| ||| ||| |||| || | ||
Sbjct 921 TGTAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTTCGGCCGTCCTCGAGCTGC 980
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
||||| ||| | |||| ||||| |||||| || |||||||||||||| || ||
Sbjct 981 TTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTC 1040
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || || || ||| ||| || |||| ||| ||||| ||||| ||
Sbjct 1041 GCCTTCACATTGTCGATGGTGTCGGAGGATTCGACCTCTAGGGTTATGGTCTTACCCGTA 1100
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
|| ||||| || || || |||||
Sbjct 1101 AGGGTTTTCACGAAGATCTGCAT 1123
>seq248859
Length=290
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || |||||||| || || || || ||||| || || || | || |||| ||
Sbjct 263 ACCAAGTGAAGGGTCGACTCCTTCTGAATGTTATAGTCAGCAAGGGTCCTGCCGTCCTCA 204
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| || | ||||| | ||| ||||| || || ||||||||||| |
Sbjct 203 AGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGA 144
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| ||| ||| | || || ||||| | |||| || || || || ||||| ||
Sbjct 143 ATCTTGGCTTTAACATTATCAATGGTATCAGAACTTTCAACCTCCAACGTGATGGTCTTC 84
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || || || ||||| ||||||||
Sbjct 83 CCAGTGAGGGTCTTAACAAAGATTTGCAT 55
>seq86164
Length=2128
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| || ||||| || ||||| ||||||||||| || ||| |||| ||
Sbjct 124 ACCAAATGGAGCGTAGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCGGCCGTCCTCG 183
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| ||| | |||| | ||| ||||| ||||| || ||||||||
Sbjct 184 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 243
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| | || || || || |||| || || | ||| ||||| ||
Sbjct 244 ATCTTAGCTTTGACATTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTT 303
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || |||||||| ||||| || |||||
Sbjct 304 CCGGTAAGAGTTTTCACAAAGATCTGCAT 332
>seq33053
Length=1800
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||| || || || || || |||||||| ||| || ||| |||| || | |||
Sbjct 1542 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGT 1483
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| || ||| | |||| |||||| |||||| || |||||||||||||| || |||
Sbjct 1482 TTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTG 1423
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || || || ||| || || |||| ||| ||||| || || ||
Sbjct 1422 GCCTTGACATTGTCGATTGTGTCGGAGGACTCGACCTCTAGGGTTATGGTCTTGCCCGTT 1363
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
|| ||||| || || || |||||
Sbjct 1362 AGGGTTTTCACGAAGATCTGCAT 1340
>seq148231
Length=1271
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||| || || || || |||||||||||| ||| ||| ||||||| | |||
Sbjct 668 ATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCGTCTTCAAGTTG 609
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||| |||||| | |||| | ||| ||||| |||||| ||||||||||| || ||
Sbjct 608 TTTCCCAGCGAAGATCAGCCTCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGGATCTT 549
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
|| || | || || || ||| | | || || || | || || || || || ||
Sbjct 548 AGCCTTCACGTTGTCGATGGTGTCGGAACTCTCCACCTCGAGCGTGATCGTCTTTCCCGT 489
Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176
|| ||||| ||||| || |||||
Sbjct 488 GAGGGTTTTCACAAAGATCTGCAT 465
Score = 82.4 bits (90), Expect = 5e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| |||||||| || || || || |||||||||||| | | | |||| ||
Sbjct 901 ACCAAATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCCAAGGTACGACCGTCCTCC 842
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
|| || ||||| ||| | |||| | ||| ||||| ||||| || ||||||||
Sbjct 841 AACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGG 782
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || || | ||||| || || | | || || |||| ||||||||| ||
Sbjct 781 ATCTTGGCCTTCACGTTGTCTATGGTGTCCGAACTCTCGACTTCTAGGGTAATGGTCTTG 722
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| ||||| || ||||||
Sbjct 721 CCGGTAAGGGTTTTCACAAAGATCTGCATA 692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355667027967125
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