Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq15585 129 5e-25 seq148231 125 6e-24 seq5063 116 3e-21 seq4315 107 2e-18 seq208788 96.9 3e-15 seq380537 87.8 2e-12 seq43027 84.2 2e-11 seq314259 82.4 7e-11 seq107409 82.4 7e-11 >seq15585 Length=2740 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || ||||| || | | || ||||| ||||| || ||||| ||||| || || ||| Sbjct 235 CCACCGCGAAGGCGAAGAACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCT 176 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| || || | |||||||| ||| | ||||| |||||||||||||||||| Sbjct 175 AGGGTTCGGCCGTCTTCAAGCTGTTTTCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGGA 116 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || ||||| || || || || || |||| || | || | ||||||||| |||||| Sbjct 115 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTCTCGAC 57 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| | || ||||||||||| ||||| || || || ||||| Sbjct 56 CTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 9 >seq148231 Length=1271 Score = 125 bits (138), Expect = 6e-24 Identities = 170/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 || ||||| || ||||| | ||| ||||| || || || ||||| ||||| |||||||| Sbjct 466 ATCCCTCCACGAAGCCTGAGCACCAGATGAAGAGTCGACTCCTTCTGGATGTTATAATCC 407 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 ||| | |||| || |||| || || || ||| | |||| | ||||| ||||| Sbjct 406 GCT-AGGGTTCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGATCCGG 348 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288 |||||| ||||| ||||| || || || |||| || | || | ||||||||| || Sbjct 347 CGGAATTCCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCGGAACTCT 289 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || | ||| | ||| ||||||||||| ||||| || || || ||||| Sbjct 288 CGACCTCCAAAGTGATCGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 237 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || ||||| ||||| || ||||| ||||| || || ||| Sbjct 238 ATACCACCGCGAAGACGAAGTACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 179 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| || || | |||||||| ||| | |||| ||||||||||| || Sbjct 178 GCTAGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGGCGTTGCTGGTCAGGA 119 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || || || || || |||| || | || | ||||||||| ||| Sbjct 118 GGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTCTC 60 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| |||||||| | || ||||||||||| ||||| || || || ||||| Sbjct 59 GACCTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 9 Score = 105 bits (116), Expect = 6e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | ||| ||||| || || ||||| ||||| || |||||| Sbjct 694 ATACCTCCACGAAGACGAAGCACCAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCG 635 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || |||| || || | |||||| || ||| | |||| | ||||||||||| Sbjct 634 GCGAGGGTTCGGCCGTCTTCAAGTTGTTTCCCAGCGAAGATCAGCCTCTGCTGGTCCGGT 575 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || ||||| || || || | || | || | |||||||||| ||| Sbjct 574 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTCA-CGTTGTCGATGGTGTCGGAACTCTC 516 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || | ||| || || || || ||||| ||||| || |||||| Sbjct 515 CACCTCGAGCGTGATCGTCTTTCCCGTGAGGGTTTTCACAAAGATCTGCATC 464 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || |||||| | ||| | || ||||| || || || ||| | Sbjct 883 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGACCGTCCTCCAACTGCTTGCCGGCGAAG 824 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| | ||||||||||| ||||| || || || || || || || || | || | Sbjct 823 ATCAGCCTCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 765 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 |||| |||||| ||| ||||||||| || |||| || |||||||| || ||||| || Sbjct 764 GTCTATGGTGTCCGAACTCTCGACTTCTAGGGTAATGGTCTTGCCGGTAAGGGTTTTCAC 705 Query 45329 AAAAATTTGCAT 45340 ||| || ||||| Sbjct 704 AAAGATCTGCAT 693 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | ||| ||||| || || ||||| ||||| || || || Sbjct 1150 ATCCCTCCACGAAGGCGGAGCACAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCA 1091 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | || |||| || ||||| || | |||| || ||||||||||| Sbjct 1090 GCGAGCGTGCGACCGTCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGG 1031 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || || || || || || | || | || | || || || ||| Sbjct 1030 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATTGTATCCGAGCTCTC 972 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| || | ||||| || |||||||| || ||||| |||||||| |||||| Sbjct 971 GACCTCCAAAGTAATTGTCTTGCCGGTGAGGGTTTTCACAAAAATCTGCATC 920 >seq5063 Length=5799 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| || || | | ||| ||||| || || ||||| ||||| || ||||| Sbjct 435 ATTCCTCCACGAAGGCGGAGCACAAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCA 376 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| | || || || || ||||| ||| | |||| || ||||||||||| Sbjct 375 GCGAGGGTGCGACCGTCCTCTAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGG 316 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || || || || || |||| || | || | ||||||||| ||| Sbjct 315 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTCTC 257 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || | ||| | || ||||||||||||||||| ||||| || ||||| Sbjct 256 GACCTCCAAAGTGATGGTCTTGCCGGTTAGAGTTTTGACAAAGATCTGCAT 206 >seq4315 Length=3911 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 |||||| | ||| | | ||| ||||| || ||||| ||||| ||||| || |||||| Sbjct 3749 TCCTCCCCTGAGGCGGAGCACCAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGC 3690 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | |||| || || | || ||||| ||| | |||| || |||||||||||||| Sbjct 3689 TAGGGTTCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATCAGCCGCTGCTGGTCCGGCGG 3630 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292 ||| || || || || || ||||| || | || | |||||| || |||||||| Sbjct 3629 AATCCCCTCCTTGTCCTGGATTTTGGCCTTCACATTGTCGATGGTGTCCGAGGACTCGAC 3570 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || | || || || ||||| ||||| || || || |||||| Sbjct 3569 CTCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 3521 >seq208788 Length=2051 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | |||| ||| || ||||||||||||||||| || ||||| Sbjct 560 ATACCACCACGGAGACGGAGGACTAAATGAAGGGTTGATTCCTTTTGGATGTTGTAATCA 501 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | || || | || ||||| ||| | ||||| | |||||| || || Sbjct 500 GCGAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAACCTTTGCTGATCTGGG 441 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || || || || || ||||| |||| || | ||| || || |||| Sbjct 440 GGAATTCCCTCCTTGTCCTGGATTTTAGCCTTGACATTGTCGATGGTATCCGAGCTCTCG 381 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || |||||||| | || || || || || ||||| || || ||||||||| Sbjct 380 ACCTCGAGAGTGATGGTCTTTCCAGTAAGGGTTTTCACGAAGATTTGCATC 330 >seq380537 Length=500 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 |||| || | |||||||| || ||||| ||||| || ||||||||||| || ||||| Sbjct 221 TTCCCCCCCTCAGCCTCAAAACCAGATGAAGCGTCGACTCCTTTTGGATGTTGTAATCCG 280 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | || | ||| |||||||| || || || | ||||||| ||||| || || | Sbjct 281 CAAGAGTCCTCCCATCTTCCAATTGCTTCCCAGCAAAAATCAATCTCTGCTGATCAGGAG 340 Query 45232 GAATGCCTTCTTTATCTTGAA 45252 | || ||||||||||| |||| Sbjct 341 GGATTCCTTCTTTATCCTGAA 361 >seq43027 Length=2960 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| | ||||||||| || ||||| || || || ||||||||||| || ||||| Sbjct 1108 TTCCTCCCCTGAGCCTCAAAACCAGATGAAGTGTCGACTCCTTTTGGATGTTGTAATCTG 1049 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | || | ||| |||||||| || || || | ||||| | ||||| || || | Sbjct 1048 CAAGAGTCCTCCCATCTTCCAATTGCTTCCCAGCAAAAATCAACCTCTGCTGATCAGGAG 989 Query 45232 GAATGCCTTCTTTATCTTGAA 45252 | || ||||| ||||| |||| Sbjct 988 GGATTCCTTCCTTATCCTGAA 968 >seq314259 Length=830 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | ||| ||||| || || ||||| ||||| || || || Sbjct 383 ATCCCTCCACGAAGGCGGAGCACAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCA 324 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | || |||| || ||||| || | |||| || ||||||||||| Sbjct 323 GCGAGCGTGCGACCGTCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGG 264 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || || || || || || | || | || | || || || ||| Sbjct 263 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATTGTATCCGAGCTCTC 205 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| || | ||||| || |||||||| || ||||| |||||||| |||||| Sbjct 204 GACCTCCAAAGTAATTGTCTTGCCGGTGAGGGTTTTCACAAAAATCTGCATC 153 >seq107409 Length=3443 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || | ||| || || |||||||||||||| || ||||| Sbjct 2419 ATACCACCACGGAGACGGAGGACCAAATGAAGGGTCGATTCCTTTTGGATGTTGTAATCA 2478 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | || ||||| || | ||||| | |||||| || || Sbjct 2479 GCGAGAGTGCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGG 2538 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || || || |||||||| |||| || | || | ||| || || || Sbjct 2539 GGAATCCCCTCCTTGTCCTGAATTTTAGCCTTGA-CGTTGTCGATGGTATCCGAGCTTTC 2597 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| || ||||| | || || || || || ||||| || || ||||||||| Sbjct 2598 GACCTCAAGAGTGATGGTCTTTCCAGTAAGGGTTTTCACGAAGATTTGCATC 2649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449765642909000