Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq237122 136 6e-27 seq265020 131 3e-25 >seq237122 Length=485 Score = 136 bits (150), Expect = 6e-27 Identities = 280/411 (68%), Gaps = 13/411 (3%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| ||||||||||| |||| || || || ||||| | | || ||||| Sbjct 447 CTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCATCCAATCAAACGGGTT 388 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 || || ||| |||| | || || || || || || || || || || || Sbjct 387 CTGAACACCATATACCTTCCCGTACCCTAGCGCTCGCAACAGCCGATCGGCAACGAACTC 328 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTCCG 159827 |||||| | |||| | ||| ||| ||||| | || | | |||| ||||| || Sbjct 327 GATGTACTGGCTCATCAACGCACCGTTCATCCCGACCAACGCGCACGGC-AGCGCGTCGC 269 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 | | ||||||| |||| ||||| ||||| ||| || ||| | ||| || || | | Sbjct 268 AGACAAACTCCCTCTCGATCTCCACCGCGTCGCGAACGATCGCCTTGACTCGCTCCTCGC 209 Query 159888 CCGGCTTG---CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 | |||| | || | | || | || ||||| ||||||||||||||||| | Sbjct 208 TCAGCTTCTTTCTCAGGAGGGAGT------AAAGCAGGCAAGCAAAGTCGCAGTGCAGAC 155 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 | ||||| || ||||| | ||||||||| | | |||| |||||||||| || || | Sbjct 154 CTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCCTCGTTTCT 95 Query 160005 TGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACG 160054 ||||||| ||||||| |||| |||| ||| || |||||||| || ||| Sbjct 94 TGAGCCAGAAAATGG-CGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACG 45 >seq265020 Length=820 Score = 131 bits (144), Expect = 3e-25 Identities = 278/410 (68%), Gaps = 9/410 (2%) Strand=Plus/Minus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| ||||||||||| |||| || || || ||||| | | || |||| Sbjct 448 TCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCATCCAATCAAACGGGT 389 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 ||| || || |||| | || || || ||| || || ||| || || || | Sbjct 388 TCTGAACACCGTACACCTTCCCGTACCCTAGCGCACCCAACAGCCGGTCGGCGACGAACT 329 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 ||||||| || |||| | | ||| ||||| | || | | || ||||| || Sbjct 328 CGATGTATTGACTCATCAAGGCGCCGTTCATCCCGACCAACGCACATGGTAGCGCGTCGC 269 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 ||| ||||||| |||| ||||| ||||| ||| || || | ||| || || | | Sbjct 268 ACACAAACTCCCTCTCGATCTCCACCGCGTCGCGGACGATAGCCTTGACTCGCTCCTCGC 209 Query 159888 CCGGCTTG--CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 | |||| || | | | | |||| | ||||| || || ||||||||||| || Sbjct 208 TCAGCTTCTTCCTCAGAAGCGAG---TAAAGA--AGGCAGGCGAAATCGCAGTGCAGGCC 154 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||||| || ||||| | ||||||||| | | |||| |||||||||| || || || Sbjct 153 TTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCCTCGTTTCTT 94 Query 160006 GAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACG 160054 |||||| ||||||| |||| |||| ||| || |||||||| || ||| Sbjct 93 GAGCCAGAAAATGG-CGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACG 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791218933274000