Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq208788 82.4 5e-11 seq107409 82.4 5e-11 seq5063 82.4 5e-11 >seq208788 Length=2051 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || || | ||| || || | ||| | ||| || || || || || ||||| || Sbjct 1698 GCCACCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGC 1639 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 |||| | | |||| |||| || ||||| |||| || | | |||||| || | || Sbjct 1638 CAAAGTCCTTCCATCCTCCAGCTGCTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGCGG 1579 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTC 39668 | ||| || ||||| | | | |||| || | || || || ||||| | |||||| Sbjct 1578 GATGCCCTCCTTGTC-CTGAATCTTTGCCTTCACATTATCAATA--GTGTCCGAGCTTTC 1522 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 ||| |||||||| || || || || || || || || || |||||||||||| Sbjct 1521 CACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCATG 1470 >seq107409 Length=3443 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || || | ||| || || | ||| | ||| || || || || || ||||| || Sbjct 1281 GCCACCACGGAGACGAAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGC 1340 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 |||| | | |||| |||| || ||||| |||| || | | |||||| || | || Sbjct 1341 CAAAGTCCTTCCATCCTCCAGCTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGCGG 1400 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTC 39668 | ||| || ||||| | | |||||| || | || || || ||||| | ||| || Sbjct 1401 GATGCCCTCCTTGTC-CTGAATTTTTGCCTTGACATTATCAATA--GTGTCCGAGCTCTC 1457 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 ||| |||||||| || || || || || || || || || |||||||||||| Sbjct 1458 CACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCATG 1509 >seq5063 Length=5799 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || || | ||| | |||||| || || || || || ||||| || | ||| | Sbjct 420 CGGAGCACAAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGGGTGCGACCG 361 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || || || || || || | || || | ||||||||| |||| ||| | ||||| ||| Sbjct 360 TCCTCTAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTG 301 Query 39625 TCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAAT 39683 || || || || | ||| | | | ||||| | ||| || || |||||||| || Sbjct 300 TCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTCTCGACCTCCAAAGTGAT 242 Query 39684 TGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || || |||| |||||| || |||||||||||| Sbjct 241 GGTCTTGCCGGTTAGAGTTTTGACAAAGATCTGCATG 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345693001628825