Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq237122 132 6e-26 seq265020 131 2e-25 seq232842 129 7e-25 seq227082 114 2e-20 seq352663 105 8e-18 seq17435 102 1e-16 seq243987 95.1 1e-14 >seq237122 Length=485 Score = 132 bits (146), Expect = 6e-26 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| || |||| || || || || || || ||||||||||| || | Sbjct 13 TCCTTCGCCGAGCGTCTGATCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGAAGC 72 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||||| |||| ||||||||||| ||||| |||||||| || ||| |||||||||| Sbjct 73 TTCTGCGCCATTTTCTGGCTCAAGAAACGAGGCCTCATGCCGGGACTCACCTTCTCCAAC 132 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| || ||||| || || ||| || ||||| Sbjct 133 GAGCTGATCTCACGAGACGAAGGTCTGCACTGCGACTTTGC 173 >seq265020 Length=820 Score = 131 bits (144), Expect = 2e-25 Identities = 119/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| || |||| || || || || || || ||||||||||| || | Sbjct 13 TCCTTCGCCGAGCGTCTGATCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGAAGC 72 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||||| |||| ||||||||||| ||||| |||||||| || ||| |||||||||| Sbjct 73 TTCTGCGCCATTTTCTGGCTCAAGAAACGAGGCCTCATGCCGGGACTCACCTTCTCCAAC 132 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||| ||||| || ||||| || || ||| Sbjct 133 GAGCTGATCTCGCGAGACGAAGGCCTGCAC 162 >seq232842 Length=5145 Score = 129 bits (142), Expect = 7e-25 Identities = 272/401 (68%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 15936 TTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAAAACCATCCATCTCTGTCA 15993 || || ||||| || || | ||||| |||| | || ||||||| ||||| ||||| | Sbjct 537 TTAGTCGCGGCAATTACGATGATACCAGTGTTACCTT--CAAAACCGTCCATTTCTGTTA 480 Query 15994 AAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTT 16053 |||||||||||| || ||||| | |||||| || || | | ||||| || | || Sbjct 479 AAAGCTGGTTAAGGGTCTGTTCTCTTTCATCGTTTCCTCCCCCAATACCAGTACCTCTTT 420 Query 16054 GCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGA 16113 || ||| || |||||||| ||||||| || || ||||| || ||| || ||| Sbjct 419 GCCGTCCAACAGCATCAATTTCATCAACAAACACAATGCAAGGCGCATTCTCCTTAGCCT 360 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 || || ||||| |||||||| || || || ||||||||||| || ||||| | | Sbjct 359 TTTTGAAAAGATCACGTACACGGGAAGCACCAACTCCAACAAACATTTCGACAAACTCAG 300 Query 16174 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | | | || | || || || ||| | ||| || ||||| ||| ||| |||||| Sbjct 299 AACCTG-AGATAGAGAAAAATGGAACACCGGCTTCCCCAGCAATAGCTTTGGCTAGAAGA 241 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 16292 ||||| || || || || ||| | || || | || ||||| || ||| | Sbjct 240 GTCTTTCCAGTTCCAGGGGGACCAACAAGAAGAACTCCCTTAGGAATGCGAGCCCCAACT 181 Query 16293 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333 || | | |||||||||| ||| | || ||||| | ||| Sbjct 180 GCAGTGAACCTCTCAGGTTTCTTCAAGAACTCCACCACCTC 140 >seq227082 Length=6038 Score = 114 bits (126), Expect = 2e-20 Identities = 198/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Plus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| ||||||||||| ||||| |||||||| || || ||||| | ||||| ||| | Sbjct 5655 AAACCCATCCATCTCCGTCAAGAGCTGGTTGATGGTCTGTTCTCTCTCATCGTTCCCA-- 5712 Query 16034 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | | | | ||||| | | ||| | |||||||||||||||||||||||||| || ||| Sbjct 5713 CCTCCAAGCCCAGCCCCTCTCTGCCTCCCCACGGCATCAATCTCATCAATGAACACAATG 5772 Query 16092 CATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCC--AC 16147 || || ||||| || || || || | |||||| ||| || | ||||| || Sbjct 5773 CACGG--CGCTTTCGACTTCGCCTTCTCGAACAAATCCCG--CACCCTCGACGCCCCAAC 5828 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 16207 || ||||||| ||||| || | | || | || || ||| || || | ||| Sbjct 5829 TCCGACAAACAATTCCACGAACTCCGAAGCCGCGCACGAGAAGAACGGCACTCCGGCTTC 5888 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 ||||| | ||| ||||| | ||||||||| || ||||| || Sbjct 5889 TCCCGCCACGGCCCGGGCCAAAAGAGTCTTTCCAGTACCGGG 5930 >seq352663 Length=3940 Score = 105 bits (116), Expect = 8e-18 Identities = 196/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Plus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| |||||||| || ||||| ||||||||||| || || || | |||||| ||| | Sbjct 2164 AAACCCATCCATTTCCGTCAAGAGCTGGTTAATGGTCTGCTCTCTTTCATCGTTCCC--A 2221 Query 16034 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | | | | ||||| | | ||| | ||||| |||||||||||||||||||| || ||| Sbjct 2222 CCTCCAAGCCCAGCCCCTCTCTGCCTCCCCACAGCATCAATCTCATCAATGAACACAATG 2281 Query 16092 CATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCC--AC 16147 || || ||||| || || || || | |||||| ||| || | ||||| || Sbjct 2282 CACGG--CGCTTTCGACTTCGCCTTCTCGAACAAATCCCG--CACTCTCGACGCCCCTAC 2337 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 16207 || ||||||| ||||| || | | || | || || ||| || || | ||| Sbjct 2338 TCCGACAAACAATTCCACGAACTCCGAAGCCGCGCACGAGAAGAACGGCACTCCGGCTTC 2397 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 ||||| | || ||||| | ||||||||| || ||||| || Sbjct 2398 TCCCGCCACCGCCCGGGCCAAAAGAGTCTTTCCAGTACCAGG 2439 >seq17435 Length=4377 Score = 102 bits (112), Expect = 1e-16 Identities = 186/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 15981 TCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA 16040 ||||||||||| ||||||||||||| || ||||| | ||||| || || | | | Sbjct 1151 TCCATCTCTGTTAAAAGCTGGTTAAGGGTCTGTTCTCTTTCATTGTTTCCTCCCCCAATA 1092 Query 16041 CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGA 16100 |||| || || |||| ||| || |||||||| ||||||| || || ||||| || | Sbjct 1091 CCAGTACCGCTTTGCCATCCAACAGCATCAATTTCATCAACAAACACAATGCAAGGCGCA 1032 Query 16101 TTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATC 16160 || || || || || ||||| |||||||| || | || ||||||||||| Sbjct 1031 TTCTCCTTGGCCTTTTTGAAAAGATCACGTACACGGGAAGCATCAACTCCAACAAACATT 972 Query 16161 TCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGC 16219 || || || | | | | | || | || || || ||| || ||| || ||||| || Sbjct 971 TCGACGAACTCAGAACCTG-AGATAGAGAAAAATGGAACACCAGCTTCCCCAGCAATTGC 913 Query 16220 TCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 ||| ||||||||||| || || || || Sbjct 912 CTTGGCTAGAAGAGTCTTTCCAGTTCCAGG 883 >seq243987 Length=636 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 15936 TTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAAAACCATCCATCTCTGTCA 15993 || || || || ||||| | ||||| |||| | || ||||||| ||||| ||||||| Sbjct 464 TTAGTCGCAGCAATGACGATGATACCAGTGTTACCTT--CAAAACCGTCCATTTCTGTCA 521 Query 15994 AAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTT 16053 |||||||||||| |||||||| | |||||| || || | | ||||| || | || Sbjct 522 AAAGCTGGTTAAGGGTTTGTTCTCTTTCATCGTTTCCTCCCCCAATACCAGTACCTCTTT 581 Query 16054 GCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGG 16096 | ||| || |||||||| ||||||| || || ||||| || Sbjct 582 GGCGTCCAACAGCATCAATTTCATCAACAAACACAATGCAAGG 624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617669531138000