Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq232842 122 1e-22 seq237122 105 8e-18 seq227082 104 3e-17 seq265020 100 3e-16 seq185790 98.7 1e-15 seq243987 96.9 4e-15 seq17435 93.3 5e-14 seq352663 89.7 6e-13 >seq232842 Length=5145 Score = 122 bits (134), Expect = 1e-22 Identities = 268/399 (67%), Gaps = 2/399 (1%) Strand=Plus/Minus Query 9243 TTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAA 9302 || |||||||| || || | ||||| || | | |||||||| ||||| ||||| ||| Sbjct 537 TTAGTCGCGGCAATTACGATGATACCAGTGTTACCTTCAAAACCGTCCATTTCTGTTAAA 478 Query 9303 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC 9362 || ||||||| || ||||| | |||||| || || | | ||||| || | |||| Sbjct 477 AGCTGGTTAAGGGTCTGTTCTCTTTCATCGTTTCCTCCCCCAATACCAGTACCTCTTTGC 418 Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422 ||| || |||||||| ||||||| || ||||| || || ||| || || || Sbjct 417 CGTCCAACAGCATCAATTTCATCAACAAACACAATGCAAGGCGCATTCTCCTTAGCCTTT 358 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482 | || ||||| || || | || || || ||||||||||| || ||||| | | Sbjct 357 TTGAAAAGATCACGTACACGGGAAGCACCAACTCCAACAAACATTTCGACAAACTCAGAA 298 Query 9483 GCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9541 | | | || | || || || ||| | ||| || ||||| ||| ||| |||||||| Sbjct 297 CCTG-AGATAGAGAAAAATGGAACACCGGCTTCCCCAGCAATAGCTTTGGCTAGAAGAGT 239 Query 9542 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCC 9601 ||| || || || || ||| | || || | ||| ||||| || ||| | | Sbjct 238 CTTTCCAGTTCCAGGGGGACCAACAAGAAGAACTCCCTTAGGAATGCGAGCCCCAACTGC 179 Query 9602 AAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 | | | |||||||||| ||| | || ||||| | ||| Sbjct 178 AGTGAACCTCTCAGGTTTCTTCAAGAACTCCACCACCTC 140 >seq237122 Length=485 Score = 105 bits (116), Expect = 8e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| ||||| || ||||| || || || || || |||||| || || Sbjct 173 GCAAAGTCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGTCCC 114 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 |||||||| || || ||||| | ||| |||| |||||||| |||||||||||||| Sbjct 113 GGCATGAGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATC 54 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 || || || || || || || | || |||||||||||||| Sbjct 53 CCTTCGACGCAGGCGAAGGCGATCAGACGCTCGGCGAAGGA 13 >seq227082 Length=6038 Score = 104 bits (114), Expect = 3e-17 Identities = 193/279 (69%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| ||||||||||| ||||| || ||||| || || ||||| | ||||| ||| | Sbjct 5655 AAACCCATCCATCTCCGTCAAGAGCTGGTTGATGGTCTGTTCTCTCTCATCGTTCCCA-- 5712 Query 9341 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 | | | | ||||| | | ||| | |||||||||||||||||||||||||| ||||| Sbjct 5713 CCTCCAAGCCCAGCCCCTCTCTGCCTCCCCACGGCATCAATCTCATCAATGAACACAATG 5772 Query 9399 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 || || | ||| | || | || || | ||| || ||||| || || || || Sbjct 5773 CACGG-CGCTTTCGACTTCGCCTTCTCGAACAAATCCCGCACCCTCGACGCCCCAACTCC 5831 Query 9458 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9517 ||||||| ||||| || | | || | || || ||| || || | ||| || Sbjct 5832 GACAAACAATTCCACGAACTCCGAAGCCGCGCACGAGAAGAACGGCACTCCGGCTTCTCC 5891 Query 9518 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 ||| | ||| ||||| | ||||||||| || ||||| || Sbjct 5892 CGCCACGGCCCGGGCCAAAAGAGTCTTTCCAGTACCGGG 5930 >seq265020 Length=820 Score = 100 bits (110), Expect = 3e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || || || ||||| || || || || || |||||| || || |||||||| || Sbjct 162 GTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCC 103 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || ||||| | ||| |||| |||||||| |||||||||||||| || || || || Sbjct 102 TCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCA 43 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 || || || | || |||||||||||||| Sbjct 42 GGCGAAGGCGATCAGACGCTCGGCGAAGGA 13 >seq185790 Length=5091 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 107163 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC 107222 ||| ||| || |||||||| || | |||||| ||||| || | |||||| ||||| || Sbjct 2190 ACACCTGAGGCCTTGGTGTTCCTGAATTGAAAAGGGTGGGAGAGGCGTGAGTGAACCAAC 2131 Query 107223 CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 107282 || |||||| ||| ||||||| | |||||||||||| | | ||| || || | Sbjct 2130 GCTGAGACATCATGTGATATGTCTTGATAGTAGAATCAATGTCATTCTTGTGAATTCCAA 2071 Query 107283 TGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGA- 107341 || || | ||| ||||||| || || | || | | | |||| | || | | Sbjct 2070 CAGCAACCCTCATCAACATGTGCTGAGGCCTCTCAACAACCTTCCCAT-GTACCTTCAAG 2012 Query 107342 AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCCG 107394 ||||| | |||||||||| |||| ||||||||| || | ||| ||||||| Sbjct 2011 AGATATGACCTCTCAAGGGTCTTGAAGCCAAAGTAATCATAGTCAAAGTCCCG 1959 >seq243987 Length=636 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 9243 TTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAA 9302 || ||||| || ||||| | ||||| || | | |||||||| ||||| ||||||||| Sbjct 464 TTAGTCGCAGCAATGACGATGATACCAGTGTTACCTTCAAAACCGTCCATTTCTGTCAAA 523 Query 9303 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC 9362 || ||||||| |||||||| | |||||| || || | | ||||| || | ||| Sbjct 524 AGCTGGTTAAGGGTTTGTTCTCTTTCATCGTTTCCTCCCCCAATACCAGTACCTCTTTGG 583 Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGG 9403 ||| || |||||||| ||||||| || ||||| || || Sbjct 584 CGTCCAACAGCATCAATTTCATCAACAAACACAATGCAAGG 624 >seq17435 Length=4377 Score = 93.3 bits (102), Expect = 5e-14 Identities = 184/270 (68%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 9288 TCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA 9347 ||||||||||| ||||| ||||||| || ||||| | ||||| || || | | | Sbjct 1151 TCCATCTCTGTTAAAAGCTGGTTAAGGGTCTGTTCTCTTTCATTGTTTCCTCCCCCAATA 1092 Query 9348 CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGA 9407 |||| || || |||| ||| || |||||||| ||||||| || ||||| || || | Sbjct 1091 CCAGTACCGCTTTGCCATCCAACAGCATCAATTTCATCAACAAACACAATGCAAGGCGCA 1032 Query 9408 TTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATC 9467 || || ||| ||| || ||||| || || | || | || ||||||||||| Sbjct 1031 TTCTCCTTGGCCTTTTTGAAAAGATCACGTACACGGGAAGCATCAACTCCAACAAACATT 972 Query 9468 TCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGC 9526 || || || | | | | | || | || || || ||| || ||| || ||||| || Sbjct 971 TCGACGAACTCAGAACCTG-AGATAGAGAAAAATGGAACACCAGCTTCCCCAGCAATTGC 913 Query 9527 TCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 ||| ||||||||||| || || || || Sbjct 912 CTTGGCTAGAAGAGTCTTTCCAGTTCCAGG 883 >seq352663 Length=3940 Score = 89.7 bits (98), Expect = 6e-13 Identities = 190/279 (68%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| |||||||| || ||||| || |||||||| || || || | |||||| ||| | Sbjct 2164 AAACCCATCCATTTCCGTCAAGAGCTGGTTAATGGTCTGCTCTCTTTCATCGTTCCCA-- 2221 Query 9341 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 | | | | ||||| | | ||| | ||||| |||||||||||||||||||| ||||| Sbjct 2222 CCTCCAAGCCCAGCCCCTCTCTGCCTCCCCACAGCATCAATCTCATCAATGAACACAATG 2281 Query 9399 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 || || | ||| | || | || || | ||| || || || || || || || Sbjct 2282 CACGG-CGCTTTCGACTTCGCCTTCTCGAACAAATCCCGCACTCTCGACGCCCCTACTCC 2340 Query 9458 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9517 ||||||| ||||| || | | || | || || ||| || || | ||| || Sbjct 2341 GACAAACAATTCCACGAACTCCGAAGCCGCGCACGAGAAGAACGGCACTCCGGCTTCTCC 2400 Query 9518 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 ||| | || ||||| | ||||||||| || ||||| || Sbjct 2401 CGCCACCGCCCGGGCCAAAAGAGTCTTTCCAGTACCAGG 2439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587060210671000