Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq3 605 3e-168 seq332406 136 4e-27 seq333312 129 7e-25 seq295831 127 2e-24 seq181776 118 1e-21 seq137405 114 1e-20 seq371407 93.3 5e-14 seq303336 82.4 9e-11 seq223344 82.4 9e-11 seq8393 82.4 9e-11 >seq3 Length=31233 Score = 605 bits (670), Expect = 3e-168 Identities = 726/984 (74%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| | ||||| |||| ||||| ||||| || Sbjct 1662 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1603 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| | || || |||||||| || Sbjct 1602 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCCC 1544 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | |||||||| | || ||||| | ||||||||||| Sbjct 1543 TCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1484 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || |||| |||| || || ||| | ||||| |||||||| Sbjct 1483 TATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTACCCAAT 1424 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| ||| | | ||||| |||||||| |||||||||||||| |||| | | Sbjct 1423 CTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGTTAATTGT 1364 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849 | |||||| || | || | || || |||||| | |||||||| | | | | Sbjct 1363 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 1304 Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 1303 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 1244 Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969 || ||| | | || ||| ||||||| || || ||||| ||||||||||||||||| Sbjct 1243 TGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAAT 1184 Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029 ||||| || |||||||||||| | ||||||||||| ||||||||||| |||||||| || Sbjct 1183 CTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 1124 Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089 || || ||| ||| ||||| ||| | ||||| || || |||||| || |||||||| Sbjct 1123 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 1064 Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149 ||| | ||||| ||| | | ||||| || || || || | ||||| || | || Sbjct 1063 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGG 1004 Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209 ||||| ||||||||||| |||||||||||||||||||| || || ||||| || || || Sbjct 1003 TTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGG 944 Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 |||| |||||||| ||||||||||||||||| || | | | |||||||||||||| Sbjct 943 CCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTAGC 884 Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 169329 | | || || ||| || | ||||| ||| || | ||||| | || ||||| ||||| Sbjct 883 TGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATTAGCACTATGGCTTTCAA 824 Query 169330 CTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTAC 169389 ||| || || ||||| || || ||||| || || ||| | | ||| | ||| ||| Sbjct 823 CTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 764 Query 169390 ATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 169449 |||| ||| | ||||| | || || |||||||||||||| ||||| |||||||| || Sbjct 763 TTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGCACGAGCGTAATGC 704 Query 169450 TCACAACTTCCCACTAGACTTAGC 169473 ||| |||||||| |||||| |||| Sbjct 703 TCATAACTTCCCTCTAGACCTAGC 680 >seq332406 Length=435 Score = 136 bits (150), Expect = 4e-27 Identities = 197/276 (71%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 169199 GGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTT--C 169256 || || || || |||| |||||||| ||||||||||||||||| || | |||| | Sbjct 1 GGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTC--TCATTCTTTAC 58 Query 169257 ACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTA 169316 ||||||||||||| | | || | ||| || | | ||| ||| || | ||||| | Sbjct 59 ACTTCTTCCTAGCTGCTTGGCCTATAGTAGGTATTTTGTTTACCGCTTTAGGTATTAGCG 118 Query 169317 CAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTA 169376 | ||||| |||||||| | || ||||| || || |||| || || ||| | | | | Sbjct 119 CTATGGCTTTCAACTTAGATGGTTTTAATTTCAATCAATTTGTAGTTGATAGTCAAGCTC 178 Query 169377 AGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGC 169436 | ||| ||| |||| ||| | ||||| | || || ||||||||| |||| |||| Sbjct 179 GTGTAATTAATACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGAAAGTTATGC 238 Query 169437 ATGAGCGTAACGCTCACAACTTCCCACTAGACTTAG 169472 | |||||||| ||||| ||||||| ||||| ||| Sbjct 239 ACGAGCGTAATGCTCATGACTTCCCTGTAGACCTAG 274 >seq333312 Length=291 Score = 129 bits (142), Expect = 7e-25 Identities = 203/286 (71%), Gaps = 11/286 (4%) Strand=Plus/Minus Query 168749 GATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT--CT-TCCACTTCCTAATC 168805 ||||| |||||||| |||||||||||||| |||| ||| || | |||||| || | Sbjct 283 GATGAATGGTTATACAATGGTGGTCCTTATGAGTT---AATTGCTCTACACTTCTTACTT 227 Query 168806 GGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGACTAGGT-ATGAG--- 168861 || | || || |||||| |||||||| | | | | || ||| ||||| Sbjct 226 GGTGTAGCTTGTTATATGGGTCATGAGTGGGAACTTAGTTTCTGTCTGGGTCATGAGTGG 167 Query 168862 -ACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTG 168920 | ||| | | | || |||||||| || || | | || ||| || ||| | Sbjct 166 GAACTTAGTTTTCGTCTGGGTATTCAGCTCCTGTTGCAGTTGCTACTGCTGTTTTCTTGA 107 Query 168921 TATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACAT 168980 | || ||| || |||| || || ||||| ||||||||||||||||| ||||| || | Sbjct 106 TCTATCCAATTAGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTT 47 Query 168981 TCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCA 169026 ||||||||||| | ||||||||||| ||||||||||| |||||||| Sbjct 46 TCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 1 >seq295831 Length=1525 Score = 127 bits (140), Expect = 2e-24 Identities = 201/284 (71%), Gaps = 8/284 (3%) Strand=Plus/Plus Query 168504 TAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCATGTT 168563 |||| |||||| | ||| ||||| |||| ||||| | ||| || |||||||| | Sbjct 1239 TAACCAGCACTGAAAACCATCTTTACATTGGATGGTTTGTTGTTTTGATGATCCCTACCT 1298 Query 168564 TATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACCACCTGTCGATATC 168622 |||| || ||| | ||| || ||| | || || |||||||| || || | ||||| Sbjct 1299 TATTGACCGCAACTTT-TGTATTTATTATCGCTTTCATTGCTGCCCCTCCGATAGATATT 1357 Query 168623 GACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTCAGGT 168682 || || | | |||||||| || | ||| | ||||||||||| || || || ||| Sbjct 1358 GATGGTGTTCGTGAACCTGTTTTTGGATCCCTACTTTATGGAAACAATATTATTTCTGGT 1417 Query 168683 GCAGTTGTTCCATCTT---CAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGCA 168739 || || |||| ||| ||| || ||| | ||||| |||||||| |||||||| Sbjct 1418 GCCATTATTCCTACTTTTGCAA---TTATAGGTTTGCACTTTTACCCAATCTGGGAAGCG 1474 Query 168740 GCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTT 168783 ||| | | ||||| |||||||| ||||| |||||||| |||| Sbjct 1475 GCTTCTGTTGATGAATGGTTATACAATGGAGGTCCTTATGAGTT 1518 >seq181776 Length=4072 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 169019 CTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCC 169078 |||||||| || || || ||| ||| ||||| ||| | ||||| | || |||||| Sbjct 4070 CTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCAGCTCCCTATTCAGT 4011 Query 169079 GCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCT 169138 || ||||||||||| | ||||| ||| | | ||||| || || || || | |||||| Sbjct 4010 GCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCT 3951 Query 169139 CAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACAT 169198 || | |||||| ||||||||||| |||||||||||||||||||| | || ||| Sbjct 3950 GTTAATGAAAGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAACCGCTCAT 3891 Query 169199 GGATA 169203 || || Sbjct 3890 GGTTA 3886 >seq137405 Length=2057 Score = 114 bits (126), Expect = 1e-20 Identities = 358/546 (66%), Gaps = 20/546 (4%) Strand=Plus/Plus Query 168943 TTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCA 169002 ||| | ||| | |||||| ||||||| | | || || ||||| ||| | |||| | Sbjct 608 TTTTTTTGACCGCATGCCTTTAGGAATCTGCTGTACTTTGAACTTTATGATTATATTATA 667 Query 169003 AGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGG 169062 ||| ||||||||| |||||||| | || | ||| ||| ||||| || | ||| Sbjct 668 AGCTATGCACAACATCCTTATGCACCTATTTCGCATGTTAGGTGTAGCTAGTGTATTCAA 727 Query 169063 TGGATCTCTATTCTCCGCAATGCATGGTTCACTTG-TAACATCTTCTCTAATCAGAGAGA 169121 || || |||||| || || ||||||| || | ||| ||| | | |||| | | Sbjct 728 CGGCTCCCTATTCAGTGCTATACATGGTTT-CTCGATAATCTCTAGTTTGATCAAGGCAA 786 Query 169122 CTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAA-CCTAT 169180 | || | | |||| || | ||| | | |||| |||| | ||| ||| ||||| Sbjct 787 CCACAAAAAATAAATCCGTTAATAAAGGTCATATATTCGATCAAAAGGAAAAAAACCTAT 846 Query 169181 AATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAAC 169240 ||| |||| || || |||| || || || |||| |||||||| || || ||||||| Sbjct 847 AATGTTGTAGCCGCTTATGGTTATTTTGGCCGATTGATCTTCCAACATAAAAATTTCAAC 906 Query 169241 AACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATGGTTAACC 169300 || || | | | |||||||| | || | | | || || || |||| ||| Sbjct 907 AATTCTCGTTCTTTACACTTCTTTCCAGTTGCTTGGCTTGTAATAGGTACTGGGTTTACC 966 Query 169301 TCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCA-GT 169359 | | | ||| | || | ||| || ||||| || |||||| | ||| |||| | | Sbjct 967 GCCTTAGATATTAGCACTACGGCTTTTAACTT-AAAGGATTTTAATTT---CAATTACTT 1022 Query 169360 TGTA---GATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAA 169416 |||| |||| | | ||| | ||| ||| |||| ||| | ||||| || || Sbjct 1023 TGTAGCTGATGGTCAAGGTTGTGTAATTAATACTTGGGCTGATATCATTAACCATGCCAA 1082 Query 169417 CCTTGGTATGGAAGTAATGCATGAGC-------GTAACG--CTCACAACTTCCCACTAGA 169467 ||| ||||| |||| |||||||||| |||| | ||| |||||||| |||| Sbjct 1083 TCTTCGTATGAAAGTTATGCATGAGCGACGGGAGTAATGGTATCATAACTTCCCCTTAGA 1142 Query 169468 CTTAGC 169473 |||||| Sbjct 1143 CTTAGC 1148 >seq371407 Length=281 Score = 93.3 bits (102), Expect = 5e-14 Identities = 142/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 168707 ATCGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAAT 168766 || ||| | || || |||||||| |||||||| | | | | ||||| |||||||| ||| Sbjct 194 ATAGGTTTGCATTTTTACCCAATCTGGGAAGCGGTT-CTGTTGATGAATGGTTATACAAT 136 Query 168767 GGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGT 168826 ||||||||||| ||| | | | |||||| || | || | || || |||||| Sbjct 135 GGTGGTCCTTATGTGTTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGT 76 Query 168827 AGACAGTGGGAA-TTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTC 168885 | |||||||| ||| | | | ||||||||| | |||||||| |||||| ||||| Sbjct 75 CGTGAGTGGGAACTTAGTTTTC-GTCTAGGTATGCGCCCTTGGATTGCTGTTGCATATTC 17 Query 168886 AGCACCAGTATCTGCAGC 168903 ||| || || |||||| Sbjct 16 AGCTCCTGT---TGCAGC 2 >seq303336 Length=741 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 168509 AGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCATGTTTATTA 168568 |||||| | ||| | ||||| |||| ||||| ||||| || |||||||| ||| || Sbjct 549 AGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTACTA 608 Query 168569 ACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACCACCTGTCGATATCGACGG 168627 || ||| | | ||| || ||| | | || |||||| | || | || |||| || || Sbjct 609 ACCGCAACTTC-TGTATTTATTATCACTTTCATTGCTACCCCTCTGGTACATATTGATGG 667 Query 168628 AATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTCAGGTGCAGT 168687 || | |||||| | | || ||||| | ||||||||||| || || || ||||| | Sbjct 668 TATTCGTGAACCTATTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCAT 727 Query 168688 TGTTCCATCTTC 168699 | |||| |||| Sbjct 728 TATTCCTACTTC 739 >seq223344 Length=745 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 169404 TTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCAC 169463 ||||| | || || |||||||||||||| |||||||||||||| ||||| ||||| || | Sbjct 681 TTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAGCGTAATGCTCATAACTTTCCTC 622 Query 169464 TAGACTTAGC 169473 ||||| |||| Sbjct 621 TAGACCTAGC 612 >seq8393 Length=1872 Score = 82.4 bits (90), Expect = 9e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 168666 ACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACC 168725 |||| || || | ||||| || |||| |||| | || || ||| | ||||| |||| Sbjct 1186 ACAATATTATTTATGGTGCCATTATTCCTACTTCTACAGCTATAGGTTTGCACTTTTACC 1127 Query 168726 CAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTT 168783 |||| | |||||| ||| | | ||||| |||||||| |||||||||||||| |||| Sbjct 1126 CAATCTAGGAAGCGGCTTCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGTT 1069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561647437692000