Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq172718 87.8 2e-12 seq136752 87.8 2e-12 seq157704 84.2 3e-11 >seq172718 Length=1671 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 182962 AACTTTAAGGATGAATTTAGCCATGGCTAAAGCTTACAATGCAGATTTTGATGGAGATGA 183021 |||||| || |||||||| | | ||| | | |||||||| ||||||||||| ||||| Sbjct 464 AACTTTCCGGCTGAATTTATCTGTCACTACACCATACAATGCTGATTTTGATGGTGATGA 405 Query 183022 AATGAATTTACATGTTCCTCAGTCGTATGAAGCTACCGCTGAATTAATGGA 183072 ||||||| | || ||||||||||||| ||| | | || ||| || |||| Sbjct 404 AATGAATATGCACGTTCCTCAGTCGTTTGAGACCAGGGCAGAAGTATTGGA 354 >seq136752 Length=4609 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 182962 AACTTTAAGGATGAATTTAGCCATGGCTAAAGCTTACAATGCAGATTTTGATGGAGATGA 183021 |||||| || |||||||| | | ||| | | |||||||| ||||||||||| ||||| Sbjct 3295 AACTTTCCGGCTGAATTTATCTGTCACTACACCATACAATGCTGATTTTGATGGTGATGA 3236 Query 183022 AATGAATTTACATGTTCCTCAGTCGTATGAAGCTACCGCTGAATTAATGGA 183072 ||||||| | || ||||||||||||| ||| | | || ||| || |||| Sbjct 3235 AATGAATATGCACGTTCCTCAGTCGTTTGAGACCAGGGCAGAAGTATTGGA 3185 >seq157704 Length=4603 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 182962 AACTTTAAGGATGAATTTAGCCATGGCTAAAGCTTACAATGCAGATTTTGATGGAGATGA 183021 |||||| || |||||||| | | ||| | | |||||||| ||||||||||| ||||| Sbjct 3289 AACTTTCCGGCTGAATTTATCTGTCACTACACCATACAATGCTGATTTTGATGGTGATGA 3230 Query 183022 AATGAATTTACATGTTCCTCAGTCGTATGAAGCTACCGCTGAATTAATGGA 183072 |||||| | || ||||||||||||| ||| | | || ||| || |||| Sbjct 3229 AATGAACATGCACGTTCCTCAGTCGTTTGAGACCAGGGCAGAAGTACTGGA 3179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655143898409000