Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq185790 96.9 4e-15 >seq185790 Length=5091 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 || |||||||| | ||| | ||||| | || | || | || |||||| ||||| ||| Sbjct 2523 CCCCCTTGATCAACATACCGAGCAGTGTCATTGAACACCCGTAGCATTGGAACAATGCCA 2464 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 || ||| | ||||| |||||| |||||||||||| | | | ||||| || ||| Sbjct 2463 TTAGATGTCCCATTTGTTCCCCGAATATAACTTCCCATCGAGCGAATATTGTGAACTGAG 2404 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | ||| || || || || |||| ||| | |||||| || | ||| || || || Sbjct 2403 ACACCAATTCCTCCAGCTGATTTACTTATAACTGCACACTCCTTCAAGGTGTCGTATATG 2344 Query 48540 CCTTCTATACTATCATCTATCAT 48562 ||||| || ||||||||| |||| Sbjct 2343 CCTTCAATGCTATCATCTTTCAT 2321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559326185781000