Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq3 524 2e-144 seq333312 120 9e-23 seq332406 116 1e-21 seq295831 114 4e-21 seq371407 98.7 3e-16 seq303336 82.4 2e-11 >seq3 Length=31233 Score = 524 bits (580), Expect = 2e-144 Identities = 706/983 (72%), Gaps = 0/983 (0%) Strand=Plus/Plus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 |||||||| || |||||||| || || |||||||| |||||||||||||| || | | Sbjct 680 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCCATACCAAGATTA 739 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 |||||||||| || ||||||||||| | || | || | |||||| || || Sbjct 740 GCACGGTTAATGATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTACAGAT 799 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 |||||||| ||||| || || | || |||||||||||| | || | |||||||| | Sbjct 800 TGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTAAAC 859 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | || ||||||||||| |||||||| |||||| || ||| || || Sbjct 860 CAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAAA 919 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 || ||||| |||||||| | || ||||| || |||||||| || ||||| ||||| || Sbjct 920 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTT 979 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 36332 ||||| ||||| |||||| | || || | || |||||| | || ||||| | Sbjct 980 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCCCTG 1039 Query 36333 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 36392 || | ||||| || | || ||||||||| ||||| | || |||||||| Sbjct 1040 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 1099 Query 36393 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 36452 || || ||||| | ||| || || || ||||||||||| ||||| || || || || ||| Sbjct 1100 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACA 1159 Query 36453 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 36512 | ||| || |||||||| || || || || ||||||||||| ||||| || || ||||| Sbjct 1160 ATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGA 1219 Query 36513 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 36572 |||| || |||| ||||| |||||| || ||||||||||| |||||||| || ||| Sbjct 1220 CCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 1279 Query 36573 CATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 36632 ||||| || | |||||| || | ||||||||||||| | || |||| ||| Sbjct 1280 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 1339 Query 36633 GAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCAC 36692 | | ||||| | ||||| | ||||| | | ||| || || || || |||||||| Sbjct 1340 GCTACACCAAGTAAGAAGTGTAGAACAATTAACTCATAAGGACCACCATTGTATAACCAT 1399 Query 36693 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGAT 36752 || || | | || ||||||||||||||||| ||||| | ||| || || || | Sbjct 1400 TCATCAACAGAAGCCGCTTCCCAGATTGGGTAAAAGTGCAAACCTATAGCCGCAGAAGTA 1459 Query 36753 GGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 36812 || | || || ||||| || || ||||||||||| |||| | ||| || ||||| ||| Sbjct 1460 GGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 1519 Query 36813 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 36872 ||||||||||| ||||| || ||||| ||||||| || || || | |||| | | | Sbjct 1520 CGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTT 1579 Query 36873 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTT 36932 || || || | | ||||||||| | || |||||||| || | || || ||||| | Sbjct 1580 GCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCA 1639 Query 36933 GTACTTGTAACCCAGTCACATAA 36955 || || || | ||||| ||| || Sbjct 1640 GTGCTGGTTATCCAGTTACAGAA 1662 >seq333312 Length=291 Score = 120 bits (132), Expect = 9e-23 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 36420 TGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATA 36479 ||||||||||| ||||| || || || || |||| ||| || |||||||| || || || Sbjct 1 TGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATT 60 Query 36480 CCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCA 36539 || ||||||||||| ||||| || || ||||| | || || |||| ||||| |||||| Sbjct 61 CCTAGAGGCATACCGTCAGAAAAGCTTCCTTGACTAATTGGATAGATCAAGAAAACAGCA 120 Query 36540 AATGCTGCTGCAACAGGGGCTGAATA 36565 || |||||||||| |||||||| Sbjct 121 GTAGCAACTGCAACAGGAGCTGAATA 146 >seq332406 Length=435 Score = 116 bits (128), Expect = 1e-21 Identities = 190/274 (69%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 35974 CTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCGG 36033 ||||||| | ||||||| || || |||||||| |||||||||| ||| || | | | Sbjct 274 CTAGGTCTACAGGGAAGTCATGAGCATTACGCTCGTGCATAACTTTCATACCAAGATTAG 215 Query 36034 CACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGACT 36093 ||||||||| || ||||||||||| | || | | | |||||| || | | Sbjct 214 CACGGTTAATGATATCAGCCCAAGTATTAATTACACGAGCTTGACTATCAACTACAAATT 155 Query 36094 GATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGCC 36153 ||||||| ||||| || | | || |||||||||| | | || | |||||||| | Sbjct 154 GATTGAAATTAAAACCATCTAAGTTGAAAGCCATAGCGCTAATACCTAAAGCGGTAAACA 95 Query 36154 ATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGC 36213 | || | | ||||||||||| |||||||| |||||| | ||| || || | Sbjct 94 AAATACCTACTATAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAATGAGAATTGTTGAAAC 35 Query 36214 TAGCATACTGGAAGATGAGTCTCCCAAAGTAGCC 36247 | ||||| |||||||| | || ||||| || || Sbjct 34 TTGCATATTGGAAGATCAATCGGCCAAAATAACC 1 >seq295831 Length=1525 Score = 114 bits (126), Expect = 4e-21 Identities = 182/260 (70%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 36657 ACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAG 36716 ||||| | | ||| || ||||| || |||||||| || || | | || ||||||||| Sbjct 1524 ACAATTAACTCATAAGGACCTCCATTGTATAACCATTCATCAACAGAAGCCGCTTCCCAG 1465 Query 36717 ATTGGGTAGAAGTGAAGACCGAT---TGCGTTCGATGATGGGACGATTGCCCCAGAGATG 36773 |||||||| ||||| | ||| || ||| | | || | || || ||||| || Sbjct 1464 ATTGGGTAAAAGTGCAAACCTATAATTGCAA---AAGTAGGAATAATGGCACCAGAAATA 1408 Query 36774 ATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACG 36833 || ||||||||||| |||| | ||| | ||||| ||||||| |||||| ||||| | Sbjct 1407 ATATTGTTTCCATAAAGTAGGGATCCAAAAACAGGTTCACGAACACCATCAATATCTATC 1348 Query 36834 GGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATC 36893 ||||| ||||||| || || || | |||| | ||| || || | | ||||||| Sbjct 1347 GGAGGGGCAGCAATGAAAGCGATAATAAATACAAAAGTTGCGGTCAATAAGGTAGGGATC 1288 Query 36894 ATTAGTACCCCAAACCACCC 36913 || | || ||||||| || Sbjct 1287 ATCAAAACAACAAACCATCC 1268 >seq371407 Length=281 Score = 98.7 bits (108), Expect = 3e-16 Identities = 139/194 (72%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 36546 GCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTA 36605 ||||||||||| |||||||| || ||| ||||| || | ||||||||| | | ||||| Sbjct 2 GCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCTAGACGAAAACTA 61 Query 36606 AGTTCCCATTGTCGTCCCAAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGT 36665 |||||||| | || |||| ||| | | ||||| | ||||| | ||||| | Sbjct 62 AGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAAC 121 Query 36666 TGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAG 36725 ||| || || || || |||||||| || || | | | ||||||||||||||||| Sbjct 122 ACATAAGGACCACCATTGTATAACCATTCATCAACAG-AACCGCTTCCCAGATTGGGTAA 180 Query 36726 AAGTGAAGACCGAT 36739 || || | ||| || Sbjct 181 AAATGCAAACCTAT 194 >seq303336 Length=741 Score = 82.4 bits (90), Expect = 2e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 36759 ATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATA 36818 || || ||||| || || ||||||||||| |||| | ||| || | ||| ||||||||| Sbjct 727 ATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAATAGGTTCACGAATA 668 Query 36819 CCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTT 36878 ||||| |||| || |||| | ||||| || | || | |||| | | ||| ||| Sbjct 667 CCATCAATATGTACCAGAGGGGTAGCAATGAAAGTGATAATAAATACAGAAGTTGCGGTT 608 Query 36879 AAAAGTGCAGGGATCATTAGTACCCCAAACCACCC 36913 | | | ||||||||| | || |||||||| || Sbjct 607 AGTAAGGTAGGGATCATCAAAACACCAAACCATCC 573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149746843517850