Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq230935 127 2e-24 seq86164 116 3e-21 seq314259 98.7 8e-16 seq208788 98.7 8e-16 seq154533 98.7 8e-16 seq148231 98.7 8e-16 seq107409 98.7 8e-16 seq4315 96.9 3e-15 seq302927 87.8 1e-12 seq92027 84.2 2e-11 >seq230935 Length=680 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||||||||| || ||| ||||| || || |||||||||| Sbjct 172 CCGCCACGGAGACGGAGCACCAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGCA 231 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || ||| |||| || | |||||| |||||||| ||||| | ||| || || | |||| Sbjct 232 AGGGTTCTGCCGTCCTCAAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGA 291 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | | || || || ||| Sbjct 292 ATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAATGGTGTCAGAGCTTTCAACC 351 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| ||||| || ||||| ||||| || || ||||||||||||||| Sbjct 352 TCCAAGGTAATGGTCTTTCCGGTCAAGGTCTTAACAAAAATCTGCATC 399 >seq86164 Length=2128 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| ||||| ||| |||||||| |||||||||| || |||| Sbjct 115 AGGCGAAGCACCAAATGGAGCGTAGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCGG 174 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| ||||| || ||||| | ||| || || | ||||| |||||| Sbjct 175 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCC 234 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| ||| | | | || || |||||||| | || Sbjct 235 TTGTCTTGGATCTTAGCTTTGACATTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTG 294 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || ||||| || | |||||| ||||| ||||||||| Sbjct 295 ATGGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCATC 333 >seq314259 Length=830 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || | |||||||| || |||||||| || || || |||||||| | Sbjct 152 CCTCCACGTAGACGGAGGACCAAATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCC 93 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| |||| ||||||||||| ||||| || ||||| | ||| || |||| |||| Sbjct 92 AAGGTACGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 33 Query 48660 ACGCCCTCCTTGTC 48673 | ||||||||||| Sbjct 32 ATCCCCTCCTTGTC 19 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || || ||||| || || |||||||| |||| || | ||| | || ||||||||| Sbjct 584 TGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGCAAGTGTGCGACCATCCTCCAACTGC 525 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| || || ||||| || |||| ||||| ||||||||||| ||||| Sbjct 524 TTCCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTG 465 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | | || || ||| ||||||| || ||||| || || || Sbjct 464 GCCTTCACATTATCAATGGTGTCCGAGCTCTCGACCTCCAGGGTGATCGTCTTGCCGGTG 405 Query 48744 AAAGTTTTTACAAAAATCTGCATC 48767 | || || || || ||||||||| Sbjct 404 AGGGTCTTGACGAAGATCTGCATC 381 >seq208788 Length=2051 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| || ||||| |||||||||| | | | | | || |||| ||| Sbjct 1674 ATGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCCTCCAGCTG 1615 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || ||||| ||||| | ||| || || | || | |||||||||||| |||||| Sbjct 1614 CTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTT 1555 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 | || ||| | | | || || || |||||||||| || || || || || || Sbjct 1554 TGCCTTCACATTATCAATAGTGTCCGAGCTTTCCACCTCCAAAGTGATGGTCTTCCCAGT 1495 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || ||||| |||||||| Sbjct 1494 CAAGGTCTTCACAAAGATCTGCAT 1471 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||||||||| || || |||||||| || || |||| ||| | || |||| || Sbjct 767 ACCAAATGTAGGGTCGATTCCTTTTGAATGTTATAGTCAGCAAGAGTACGGCCGTCCTCA 708 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| || || | ||| || || | || | ||| ||||| || Sbjct 707 AGCTGCTTTCCCGCAAAGATTAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTCTCCTGG 648 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | | ||||| || ||||| | ||||| || ||| Sbjct 647 ATCTTAGTTTTGACATTGTCAATTGTGTCTGAGCTTTCGACCTCAAGAGTAATGGTCTTT 588 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || || |||||||||||||| Sbjct 587 CCCGTCAATGTCTTCACAAAAATCTGCAT 559 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| ||| | || || || ||| || || || |||||||| | Sbjct 1470 GCCACCCCTCAGACGCAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGC 1411 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | | |||| || | ||||| ||||| || ||||| | ||| || || | || Sbjct 1410 AAGGGTCCTTCCGTCCTCAAGTTGCTTCCCGGCGAAAATCAGCCTCTGCTGGTCTGGTGG 1351 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||||||||||| ||||||| || ||| | | | | ||||| |||||| Sbjct 1350 AATCCCCTCCTTGTCTTGAATCTTTGTCTTCACATTATCAATTGTGTCTGAACTCTCCAC 1291 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | || || || ||||| || | || || |||||||||||||| Sbjct 1290 CTCGAGGGTGATGGTCTTTCCTGTAAGGGTCTTGACAAAAATCTGCAT 1243 >seq154533 Length=826 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || ||||||||||| | ||| | | | || || | ||||||||| ||||| Sbjct 378 CTCCTTCTGGATATTGTAATCCGCCAGAGTCCTCCCATCCTCGAGCTGCTTACCAGCAAA 319 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || |||| ||| || || | |||| |||||||||||| ||||||| || ||| Sbjct 318 AATAAGTCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGACTTCACATT 259 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | ||||| ||| ||||||| || ||||| || || |||| || || || Sbjct 258 GTCAATGGTGTCTGAGCTCTCGACCTCCAAGGTGATCGTCTTGCCAGTCAGGGTCTTCAC 199 Query 48755 AAAAATCTGCAT 48766 |||||||||||| Sbjct 198 AAAAATCTGCAT 187 >seq148231 Length=1271 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || | |||||||| || |||||||| || || || |||||||| | Sbjct 919 CCTCCACGTAGACGGAGGACCAAATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCC 860 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| |||| ||||||||||| ||||| || ||||| | ||| || |||| |||| Sbjct 859 AAGGTACGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 800 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| || || | | | || || ||| || Sbjct 799 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCTATGGTGTCCGAACTCTCGACT 740 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || || | ||||| ||||| |||||||| Sbjct 739 TCTAGGGTAATGGTCTTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 693 >seq107409 Length=3443 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| || ||||| |||||||||| | | | | | || |||| ||| Sbjct 1305 ATGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCCTCCAGCTG 1364 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || ||||| ||||| | ||| || || | || | |||||||||||| ||| || Sbjct 1365 CTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATTTT 1424 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 | || ||| | | | || || || ||||||||||| || || || || || || Sbjct 1425 TGCCTTGACATTATCAATAGTGTCCGAGCTCTCCACCTCCAAAGTGATGGTCTTCCCAGT 1484 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || ||||| |||||||| Sbjct 1485 CAAGGTCTTCACAAAGATCTGCAT 1508 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||||| || || ||||| || || || |||| ||| | || | || || Sbjct 2212 ACCAAATGTAAGGTCGATTCCTTTTGGATGTTATAGTCAGCGAGAGTACGGCCATCCTCA 2271 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| ||||| | ||| || || | || | ||| |||||||| Sbjct 2272 AGCTGCTTTCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGG 2331 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | | ||||| || ||||| | ||||| || ||| Sbjct 2332 ATCTTAGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAACCTCAAGGGTAATAGTCTTT 2391 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || || |||||||||||||| Sbjct 2392 CCCGTCAAGGTCTTCACAAAAATCTGCAT 2420 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| ||| | || || || ||| || || || |||||||| | Sbjct 1509 GCCACCCCTCAGACGCAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGC 1568 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | | | || || | ||||| || || || |||| || ||| || |||| || Sbjct 1569 AAGAGTCCTTCCATCCTCAAGTTGCTTCCCAGCGAAAATCAATCTCTGCTGGTCCGGCGG 1628 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | ||||||||||| ||||||| || ||| | | | || || || |||||| Sbjct 1629 GATCCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCGATAGTATCCGAACTCTCCAC 1688 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | || || || ||||| || | || || ||||| |||||||| Sbjct 1689 CTCAAGAGTGATGGTCTTTCCTGTAAGGGTCTTGACAAATATCTGCAT 1736 >seq4315 Length=3911 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| ||| || || ||| || || || |||||||| | | Sbjct 3748 CCTCCCCTGAGGCGGAGCACCAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGCT 3689 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || |||| |||| || | |||||| ||||| || ||||| ||||| || |||| ||| Sbjct 3688 AGGGTTCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATCAGCCGCTGCTGGTCCGGCGGA 3629 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| || || || ||| | | | || || | ||| ||| Sbjct 3628 ATCCCCTCCTTGTCCTGGATTTTGGCCTTCACATTGTCGATGGTGTCCGAGGACTCGACC 3569 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || ||||| | ||||| || || ||||||||| Sbjct 3568 TCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 3521 >seq302927 Length=390 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || || ||||| ||||| |||||||| | || | | |||| ||| Sbjct 203 ACCAAATGAAGGGTCGATTCTTTCTGAATGTTGTAATCGGCAAGGGTCCTGCCGTCCTCC 144 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || ||||| | ||| || || | ||| | |||||||||||| | Sbjct 143 AGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGA 84 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| |||||| | | | || || || ||||||| |||||| || ||| Sbjct 83 ATCTTGGCCTTTACATTGTCAATGGTGTCAGAGCTTTCAACCTCCAACGTAATGGTCTTT 24 Query 48738 CCCGTCAAAGTTTTTACAAAAAT 48760 || || | || || |||||||| Sbjct 23 CCAGTGAGGGTCTTCACAAAAAT 1 >seq92027 Length=2118 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 9094 TGAGCAATCCTGTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACC 9153 || |||||||| || |||| ||||| |||| || | || ||||| |||||||| | Sbjct 852 TGCGCAATCCTATCGCCCTCCTTCACTTCAAAATCCATATCAGAATGGTTGAACAGGATG 793 Query 9154 ACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGC 9213 || || || ||| |||||||| |||||||||||| || || |||||||| | ||| Sbjct 792 ACCCCAACTGGACCTCTGTAATCGGAATCGATCACACCCGCTCCGACGTCGATCGAATGC 733 Query 9214 TTGACCGCTAGTCCAGAGCGGGGCGC 9239 || ||| | || || || ||||| Sbjct 732 TTCCACGCCAACCCCGAACGAGGCGC 707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379098983841075