Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq3 603 1e-167 seq332406 163 3e-35 seq295831 127 2e-24 seq137405 127 2e-24 seq333312 111 2e-19 seq1619 105 7e-18 seq181776 104 3e-17 seq303336 89.7 6e-13 seq366516 87.8 2e-12 seq21801 84.2 2e-11 seq17565 84.2 2e-11 >seq3 Length=31233 Score = 603 bits (668), Expect = 1e-167 Identities = 730/991 (74%), Gaps = 12/991 (1%) Strand=Plus/Minus Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561 ||||||||| | ||| ||| || || | || | || ||||| ||||| |||||| Sbjct 1659 TGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATG 1600 Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621 |||||| ||| | | ||| | || || || || || |||||||| || ||||| Sbjct 1599 ATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCG 1540 Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681 || ||||| |||||||| | ||||||||| | || || || || ||||| ||||| || Sbjct 1539 GTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATT 1480 Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741 || |||||||| | |||||| ||| ||||| ||| | ||||| || || |||||| Sbjct 1479 ATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTACCCAATCTGG 1420 Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTC 162801 ||||| || || ||||||| ||||| || |||||||| |||| | | | || | Sbjct 1419 GAAGCGGCTTCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGTTAATTGTTCTA 1360 Query 162802 CACTTCCTTATCGGAATCACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGC 162858 |||||| | | || | ||| | | | |||||| ||||||||||| || ||| Sbjct 1359 CACTTCTTACTTGGTGT---AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1303 Query 162859 TTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCT 162918 | |||||||| |||||||| ||||||||| || || || || | || || ||| Sbjct 1302 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 1243 Query 162919 GTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATT 162978 || |||||| ||||||| | |||||||| || ||||||| |||||||| || || Sbjct 1242 GTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATC 1183 Query 162979 TCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCC 163038 ||||||||||| |||| |||| | || |||||||| |||||||||||||| |||||||| Sbjct 1182 TCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCA 1123 Query 163039 TTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGT 163098 || || ||| | || || || ||||||||||| || || || || ||||||||||| ||| Sbjct 1122 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 1063 Query 163099 TCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGT 163158 || | || |||||| | | ||||| ||||| || || | || || || | ||| Sbjct 1062 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGT 1003 Query 163159 TATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGT 163218 || | ||||| ||||| ||||| || || || ||||| || |||||||| || ||||| Sbjct 1002 TACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGGC 943 Query 163219 CGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCT 163278 || ||||||||||| |||||| ||||||||| || ||||| | ||||||||||| ||| Sbjct 942 CGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTAGCT 883 Query 163279 GCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAAC 163338 || | ||||| || | || ||||| || || | ||| | |||||||| |||||| Sbjct 882 GCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATTAGCACTATGGCTTTCAAC 823 Query 163339 CTTAACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCT 163395 | || ||||| || ||||| ||||| || ||||| |||| || || ||| | Sbjct 822 TTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGT---GTAATTAAT 766 Query 163396 ACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAAT 163455 |||||||| |||||| ||||| | || |||||||||||||||||||||||||||||| Sbjct 765 ACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGCACGAGCGTAAT 706 Query 163456 GCTCACAACTTCCCACTTGACCTTGCTGCTG 163486 ||||| |||||||| || ||||| |||| || Sbjct 705 GCTCATAACTTCCCTCTAGACCTAGCTGGTG 675 >seq332406 Length=435 Score = 163 bits (180), Expect = 3e-35 Identities = 209/287 (73%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 163207 GGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCAC 163266 || || ||||| || ||||||||||| |||||| ||||||||| || | ||| | ||| Sbjct 1 GGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCATTCTTTACAC 60 Query 163267 TTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACT 163326 |||||||| ||||| | ||| | || | || | ||| || || | ||| | || Sbjct 61 TTCTTCCTAGCTGCTTGGCCTATAGTAGGTATTTTGTTTACCGCTTTAGGTATTAGCGCT 120 Query 163327 ATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCAGGTGGT 163383 ||||| |||||| | | ||||| || ||||| |||| || ||||| || | || Sbjct 121 ATGGCTTTCAACTTAGATGGTTTTAATTTCAATCAATTTGTAGTTGATAGTCAAGCTCGT 180 Query 163384 AAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATG 163443 || ||| ||||||||| |||||| ||||| | || ||||||||| |||||||| Sbjct 181 ---GTAATTAATACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGAAAGTTATG 237 Query 163444 CACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTGCTGA 163490 ||||||||||||||||| ||||||| | ||||| | || || ||| Sbjct 238 CACGAGCGTAATGCTCATGACTTCCCTGTAGACCTAGTTGGTGTTGA 284 >seq295831 Length=1525 Score = 127 bits (140), Expect = 2e-24 Identities = 177/246 (72%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 162541 GGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATT 162600 || ||||| | ||| |||||||||||| ||| | | ||| | | || || || Sbjct 1268 GGATGGTTTGTTGTTTTGATGATCCCTACCTTATTGACCGCAACTTTTGTATTTATTATC 1327 Query 162601 GCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCA 162660 || |||||||| || ||||| | ||||| |||||| | | ||||||||| || || Sbjct 1328 GCTTTCATTGCTGCCCCTCCGATAGATATTGATGGTGTTCGTGAACCTGTTTTTGGATCC 1387 Query 162661 CTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTA--GTTCAAATGCTATTG 162718 || || ||||| ||||| || || |||||||| | |||||| || ||| ||| | Sbjct 1388 CTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTTTGCAAT--TATAG 1445 Query 162719 GTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTG 162778 || | ||||| || || ||||||||||| || || ||||||| ||||| || ||||| | Sbjct 1446 GTTTGCACTTTTACCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAATGGAG 1505 Query 162779 GACCTT 162784 | |||| Sbjct 1506 GTCCTT 1511 >seq137405 Length=2057 Score = 127 bits (140), Expect = 2e-24 Identities = 335/506 (66%), Gaps = 9/506 (2%) Strand=Plus/Plus Query 162951 TTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCA 163010 ||| | |||| |||||| | || || | ||||||| |||| ||| | | || | Sbjct 608 TTTTTTTGACCGCATGCCTTTAGGAATCTGCTGTACTTTGAACTTTATGATTATATTATA 667 Query 163011 AGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGG 163070 ||| |||||||||||| ||||||| || | ||| | || || || |||||||| Sbjct 668 AGCTATGCACAACATCCTTATGCACCTATTTCGCATGTTAGGTGTAGCTAGTGTATTCAA 727 Query 163071 TGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACT-TCTTCTCTTATCAGAGAAA 163129 || || || || |||||||| || |||| ||| | || | ||| | | |||| | || Sbjct 728 CGGCTCCCTATTCAGTGCTATACATGGTT-TCTCGATAATCTCTAGTTTGATCAAGGCAA 786 Query 163130 CTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAG-AAGAGACTTAC 163188 | || | | | || || | ||| ||| |||| ||| | | || | || || Sbjct 787 CCACAAAAAATAAATCCGTTAATAAAGGTCATATATTCGATCAAAAGGAAAAAAACCTAT 846 Query 163189 AACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAAC 163248 || |||| || ||| |||| || ||||| || ||||||||||| || | ||||||| Sbjct 847 AATGTTGTAGCCGCTTATGGTTATTTTGGCCGATTGATCTTCCAACATAAAAATTTCAAC 906 Query 163249 AACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACT 163308 || || ||||| | |||||||| | | ||| | | ||| | | | |||| || Sbjct 907 AATTCTCGTTCTTTACACTTCTTTCCAGTTGCTTGGCTTGTAATAGGTACTGGGTTTACC 966 Query 163309 GCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTC 163368 || | | | | |||| ||| || ||| | || | ||| || ||||| | | || Sbjct 967 GCCTTAGATATTAGCACTACGGCTTTTAACTTAAAGGATTTTAATTTCAATTACTTTGTA 1026 Query 163369 GTTGACG---CAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGA 163425 | ||| | |||| || || ||| ||||||||| |||||| ||||| || Sbjct 1027 GCTGATGGTCAAGGTTGT---GTAATTAATACTTGGGCTGATATCATTAACCATGCCAAT 1083 Query 163426 CTTGGTATGGAAGTTATGCACGAGCG 163451 ||| ||||| |||||||||| ||||| Sbjct 1084 CTTCGTATGAAAGTTATGCATGAGCG 1109 >seq333312 Length=291 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 162916 GCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGT 162975 ||||| |||||| ||||||| | ||||||| || ||||||| |||||||| || Sbjct 119 GCTGTTTTCTTGATCTATCCAATTAGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGA 60 Query 162976 ATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCA 163034 || ||||||||||| |||| |||| | || |||||||| |||||||||||||| ||||| Sbjct 59 ATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 1 >seq1619 Length=8420 Score = 105 bits (116), Expect = 7e-18 Identities = 194/282 (69%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561 ||||||||| | ||| ||||| ||||| | || | || ||||| ||||| ||||| Sbjct 2765 TGTAACTGGATAACCAGCGTTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTGTGATG 2824 Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621 |||||| ||| | | || | | || || || || || ||||| || |||| | Sbjct 2825 ATCCCTACCTT-ATGACTCCAACTTTTGTATTTATTATCGCTTTTATTGCTGC-CCTCTA 2882 Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681 || ||||| |||||||| | |||| |||| || || || || ||| | ||||| || Sbjct 2883 GTAGATATTGATGGTATTCGTGAACTTGTTTTTGGATCTCTACTTTATAGAAACAATATT 2942 Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741 || | |||| | | |||||| ||| |||| ||| | ||||| || | ||||| Sbjct 2943 ATTTTTGGTTTTATTATTCCTACTTCTGCAACTATAGGTTTGCACTTTTACTCAATCTGA 3002 Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACCT 162783 ||| || || ||||||| ||| | || |||||||| ||| Sbjct 3003 AAAGTGGCTTCTGTTGATGAATGGCTATACAATGGTGGTCCT 3044 >seq181776 Length=4072 Score = 104 bits (114), Expect = 3e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 163025 TCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTA 163084 |||| |||||||| || || ||| | || || || ||||||||||| | || || || | Sbjct 4072 TCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCAGCTCCCTATTCA 4013 Query 163085 GTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGT 163144 |||||||||| ||||| | || |||||| | | ||||| ||||| || || | || | Sbjct 4012 GTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAAT 3953 Query 163145 CACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTC 163204 | || | |||| | ||||| ||||| ||||| || || || ||||| | |||| Sbjct 3952 CTGTTAATGAAAGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAACCGCTC 3893 Query 163205 ATGGATA 163211 |||| || Sbjct 3892 ATGGTTA 3886 >seq303336 Length=741 Score = 89.7 bits (98), Expect = 6e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 162541 GGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATT 162600 || ||||| ||||| |||||||||||| ||| || | ||| | || || || || Sbjct 573 GGATGGTTTGGTGTTTTGATGATCCCTACCTTACTAACCGCAACTTCTGTATTTATTATC 632 Query 162601 GCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCA 162660 | |||||||| | |||| || |||| |||||||| | |||||| || | || || Sbjct 633 ACTTTCATTGCTACCCCTCTGGTACATATTGATGGTATTCGTGAACCTATTTCTGGATCT 692 Query 162661 CTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTC 162707 || || ||||| ||||| || || |||||||| | |||||| ||| Sbjct 693 CTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTC 739 >seq366516 Length=3420 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 163426 CTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485 ||||||||||||||||||||||||||||||||||| |||||||| || ||||| |||| | Sbjct 2767 CTTGGTATGGAAGTTATGCACGAGCGTAATGCTCATAACTTCCCTCTAGACCTAGCTGGT 2826 Query 163486 G 163486 | Sbjct 2827 G 2827 >seq21801 Length=11800 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 163381 GGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTT 163440 ||| | || ||| ||||||| | ||||| ||||| | | |||||||||||||| Sbjct 3005 GGTCATGTAATTAATACTTGGACTAATATCATTAACCGTGGTAATTTTGGTATGGAAGTT 2946 Query 163441 ATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGC 163481 ||| |||||||||||||||| |||||||| || ||||| || Sbjct 2945 ATGGACGAGCGTAATGCTCATAACTTCCCTCTAGACCTAGC 2905 >seq17565 Length=5308 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 163381 GGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTT 163440 ||| | || ||| ||||||| | ||||| ||||| | | |||||||||||||| Sbjct 5180 GGTCATGTAATTAATACTTGGACTAATATCATTAACCGTGGTAATTTTGGTATGGAAGTT 5239 Query 163441 ATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGC 163481 ||| |||||||||||||||| |||||||| || ||||| || Sbjct 5240 ATGGACGAGCGTAATGCTCATAACTTCCCTCTAGACCTAGC 5280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 550346857401000