Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq237122 116 7e-21
seq265020 111 3e-19
seq97145 107 4e-18
seq167436 93.3 8e-14
>seq237122
Length=485
Score = 116 bits (128), Expect = 7e-21
Identities = 304/458 (66%), Gaps = 7/458 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| ||||| || | ||||| |||||||| |||||||||| ||||||||| |||
Sbjct 465 CTGGTACTCCCCGACCCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTC 406
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTC-CAGCA 47957
||| | || ||||| | ||| ||| | | ||| | || || ||
Sbjct 405 CATCCAATCAAACGGGTTCTGAACACCATATACCT-TCCCGTACCCTAGCGCTCGCAACA 347
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| |||| || ||| |||||||||| | ||| | | |||||| || | | |
Sbjct 346 GCCGATCGGCAACGAACTCGATGTACTGGCTCATCAACGCACCGTTCATCCCGACCAACG 287
Query 48018 A-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||||| || || | || ||||||| |||| |||| ||| || || | || |||
Sbjct 286 CGCACGG-CAGCGCGTCGCAGACAAACTCCCTCTCGATCTCCACCGCGTCGCGAACGATC 228
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136
||| || || ||| | || || | |||| | || || |||| ||| |||
Sbjct 227 GCCTTGACTCGCTCCTCGCTCAGCTTCTTTCTCAGGAG---GGAGTAAAGCAGGCAAGCA 171
Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196
||||| | ||||| |||||||| || ||| ||| ||||||||||| ||| || |||
Sbjct 170 AAGTCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGC 111
Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256
|||| || | | |||||||||||||| || ||| || ||||||||||| ||
Sbjct 110 ATGAGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCT 51
Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGA 48294
|| || ||||| ||| | || | ||| |||| ||
Sbjct 50 TCGACGCAGGCGAAGGCGATCAGACGCTCGGCGAAGGA 13
>seq265020
Length=820
Score = 111 bits (122), Expect = 3e-19
Identities = 303/458 (66%), Gaps = 7/458 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| ||||| || || ||||| |||||||| |||||||||| ||||||||| |||
Sbjct 465 CTGGTACTCCCCGACCCTCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTC 406
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCC-ATCTGTTCCAGCA 47957
||| | || ||||| | |||||| | | ||| | | ||| ||
Sbjct 405 CATCCAATCAAACGGGTTCTGAACACCGTACACCT-TCCCGTACCCTAGCGCACCCAACA 347
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| | || |||||| |||||||||||| ||| | || | |||||| || | | |
Sbjct 346 GCCGGTCGGCGACGAACTCGATGTATTGACTCATCAAGGCGCCGTTCATCCCGACCAACG 287
Query 48018 ACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| || | || | | ||||||| |||| |||| ||| || || | || ||
Sbjct 286 -CACATGGTAGCGCGTCGCACACAAACTCCCTCTCGATCTCCACCGCGTCGCGGACGATA 228
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136
||| || || ||| | || || | ||| || | || || | ||||||
Sbjct 227 GCCTTGACTCGCTCCTCGCTCAGCTTCTTCCTCAGAAGCGAG---TAAAGAAGGCAGGCG 171
Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196
|| || | ||||| ||||||||| || ||| ||| ||||||||||| ||| || |||
Sbjct 170 AAATCGCAGTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGC 111
Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256
|||| || | | |||||||||||||| || ||| || ||||||||||| ||
Sbjct 110 ATGAGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCT 51
Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGA 48294
|| || ||||| ||| | || | ||| |||| ||
Sbjct 50 TCGACGCAGGCGAAGGCGATCAGACGCTCGGCGAAGGA 13
>seq97145
Length=990
Score = 107 bits (118), Expect = 4e-18
Identities = 190/272 (70%), Gaps = 4/272 (1%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
||||||||| ||||| | ||||| || ||||||||||| ||||||||||| | |||||
Sbjct 69 GTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGCGCCTC 128
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542
|| || || || | ||| ||| || || || ||||| || || || || |
Sbjct 129 CGCGACTTGAACCTCCTTCATGAACCTC-CCGGCGAGGTTCTCGAGTACGATTCCGTCGG 187
Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602
| || || |||||||| ||||| || | | ||| || ||||| |||||| || || |
Sbjct 188 AGGCGGCGAAGAAGGCGAGGACGTGGCTGATGAAGTGCTTCTCGTCGTGGGTCAGGGC-T 246
Query 48603 TCCAGC-CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661
|| | | | | || | | ||||||||||| || | ||||||||||| ||
Sbjct 247 TCAAACTGGCGAATATCCTGGGAGAGGTCCACTTCCTCGGCGGTCCAGAAGGAGGCCTCG 306
Query 48662 GCTTTTTTGTACATGCCCCATATGTCCGGATA 48693
||||| |||||||| |||| || || || ||
Sbjct 307 GCTTTCTTGTACATTTCCCAGATTTCTGGGTA 338
>seq167436
Length=640
Score = 93.3 bits (102), Expect = 8e-14
Identities = 187/272 (69%), Gaps = 4/272 (1%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
||||||||| ||||| | ||||| || |||||||||| ||||||||||| | |||||
Sbjct 105 GTACATCTCGGAGTGGATGTTCTCAATGCCGATCTGGAAGCCGTAGAAGGCGCGCGCCTC 164
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542
|| || || || | ||| ||| || || || ||||| ||| || || || |
Sbjct 165 CGCGACTTGAACCTCCTTCATGAACCTC-CCGGCGAGGTTCTCGAGGACGATGCCGTCGG 223
Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602
| || || || ||||| |||||||| | | ||| || ||||| | |||| || || |
Sbjct 224 AGGCGGCGAAAAAGGCGAGGACATGGGTGATGAAGTGCTTCTCGTCGGGGGTTAGGGC-T 282
Query 48603 TCCAGC-CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661
|| | | | | ||| | || || ||||| || | |||||||| || ||
Sbjct 283 TCGAACTGACGGATGTCCTGAGAAAGATCGACTTCCTCGGCGGTCCAGAAAGAGGCCTCG 342
Query 48662 GCTTTTTTGTACATGCCCCATATGTCCGGATA 48693
||||| |||||||| |||| || || |||||
Sbjct 343 GCTTTCTTGTACATTTCCCAGATTTCTGGATA 374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 926921421536000
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