Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq237122 116 7e-21 seq265020 111 3e-19 seq97145 107 4e-18 seq167436 93.3 8e-14 >seq237122 Length=485 Score = 116 bits (128), Expect = 7e-21 Identities = 304/458 (66%), Gaps = 7/458 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || | ||||| |||||||| |||||||||| ||||||||| ||| Sbjct 465 CTGGTACTCCCCGACCCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTC 406 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTC-CAGCA 47957 ||| | || ||||| | ||| ||| | | ||| | || || || Sbjct 405 CATCCAATCAAACGGGTTCTGAACACCATATACCT-TCCCGTACCCTAGCGCTCGCAACA 347 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| || ||| |||||||||| | ||| | | |||||| || | | | Sbjct 346 GCCGATCGGCAACGAACTCGATGTACTGGCTCATCAACGCACCGTTCATCCCGACCAACG 287 Query 48018 A-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||||| || || | || ||||||| |||| |||| ||| || || | || ||| Sbjct 286 CGCACGG-CAGCGCGTCGCAGACAAACTCCCTCTCGATCTCCACCGCGTCGCGAACGATC 228 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 ||| || || ||| | || || | |||| | || || |||| ||| ||| Sbjct 227 GCCTTGACTCGCTCCTCGCTCAGCTTCTTTCTCAGGAG---GGAGTAAAGCAGGCAAGCA 171 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| | ||||| |||||||| || ||| ||| ||||||||||| ||| || ||| Sbjct 170 AAGTCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGC 111 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 |||| || | | |||||||||||||| || ||| || ||||||||||| || Sbjct 110 ATGAGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCT 51 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGA 48294 || || ||||| ||| | || | ||| |||| || Sbjct 50 TCGACGCAGGCGAAGGCGATCAGACGCTCGGCGAAGGA 13 >seq265020 Length=820 Score = 111 bits (122), Expect = 3e-19 Identities = 303/458 (66%), Gaps = 7/458 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || || ||||| |||||||| |||||||||| ||||||||| ||| Sbjct 465 CTGGTACTCCCCGACCCTCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTC 406 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCC-ATCTGTTCCAGCA 47957 ||| | || ||||| | |||||| | | ||| | | ||| || Sbjct 405 CATCCAATCAAACGGGTTCTGAACACCGTACACCT-TCCCGTACCCTAGCGCACCCAACA 347 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || |||||| |||||||||||| ||| | || | |||||| || | | | Sbjct 346 GCCGGTCGGCGACGAACTCGATGTATTGACTCATCAAGGCGCCGTTCATCCCGACCAACG 287 Query 48018 ACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| || | || | | ||||||| |||| |||| ||| || || | || || Sbjct 286 -CACATGGTAGCGCGTCGCACACAAACTCCCTCTCGATCTCCACCGCGTCGCGGACGATA 228 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 ||| || || ||| | || || | ||| || | || || | |||||| Sbjct 227 GCCTTGACTCGCTCCTCGCTCAGCTTCTTCCTCAGAAGCGAG---TAAAGAAGGCAGGCG 171 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 || || | ||||| ||||||||| || ||| ||| ||||||||||| ||| || ||| Sbjct 170 AAATCGCAGTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGC 111 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 |||| || | | |||||||||||||| || ||| || ||||||||||| || Sbjct 110 ATGAGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCT 51 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGA 48294 || || ||||| ||| | || | ||| |||| || Sbjct 50 TCGACGCAGGCGAAGGCGATCAGACGCTCGGCGAAGGA 13 >seq97145 Length=990 Score = 107 bits (118), Expect = 4e-18 Identities = 190/272 (70%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| ||||| | ||||| || ||||||||||| ||||||||||| | ||||| Sbjct 69 GTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGCGCCTC 128 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542 || || || || | ||| ||| || || || ||||| || || || || | Sbjct 129 CGCGACTTGAACCTCCTTCATGAACCTC-CCGGCGAGGTTCTCGAGTACGATTCCGTCGG 187 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602 | || || |||||||| ||||| || | | ||| || ||||| |||||| || || | Sbjct 188 AGGCGGCGAAGAAGGCGAGGACGTGGCTGATGAAGTGCTTCTCGTCGTGGGTCAGGGC-T 246 Query 48603 TCCAGC-CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 || | | | | || | | ||||||||||| || | ||||||||||| || Sbjct 247 TCAAACTGGCGAATATCCTGGGAGAGGTCCACTTCCTCGGCGGTCCAGAAGGAGGCCTCG 306 Query 48662 GCTTTTTTGTACATGCCCCATATGTCCGGATA 48693 ||||| |||||||| |||| || || || || Sbjct 307 GCTTTCTTGTACATTTCCCAGATTTCTGGGTA 338 >seq167436 Length=640 Score = 93.3 bits (102), Expect = 8e-14 Identities = 187/272 (69%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| ||||| | ||||| || |||||||||| ||||||||||| | ||||| Sbjct 105 GTACATCTCGGAGTGGATGTTCTCAATGCCGATCTGGAAGCCGTAGAAGGCGCGCGCCTC 164 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542 || || || || | ||| ||| || || || ||||| ||| || || || | Sbjct 165 CGCGACTTGAACCTCCTTCATGAACCTC-CCGGCGAGGTTCTCGAGGACGATGCCGTCGG 223 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602 | || || || ||||| |||||||| | | ||| || ||||| | |||| || || | Sbjct 224 AGGCGGCGAAAAAGGCGAGGACATGGGTGATGAAGTGCTTCTCGTCGGGGGTTAGGGC-T 282 Query 48603 TCCAGC-CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 || | | | | ||| | || || ||||| || | |||||||| || || Sbjct 283 TCGAACTGACGGATGTCCTGAGAAAGATCGACTTCCTCGGCGGTCCAGAAAGAGGCCTCG 342 Query 48662 GCTTTTTTGTACATGCCCCATATGTCCGGATA 48693 ||||| |||||||| |||| || || ||||| Sbjct 343 GCTTTCTTGTACATTTCCCAGATTTCTGGATA 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 926921421536000