Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq167436 102 2e-16 seq97145 98.7 2e-15 seq237122 86.0 1e-11 >seq167436 Length=640 Score = 102 bits (112), Expect = 2e-16 Identities = 247/369 (67%), Gaps = 4/369 (1%) Strand=Plus/Minus Query 25473 AGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGA 25532 ||| || ||||| ||||||||||| || | ||| |||||||||||| || | || Sbjct 369 AGAAATCTGGGAAATGTACAAGAAAGCCGAGGCCTCTTTCTGGACCGCCGAGGAAGTCGA 310 Query 25533 TCTGGCCAAGGACAT-GGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||| | ||||||| | | | | | | || ||| || |||||| |||| || ||| Sbjct 309 TCTTTCTCAGGACATCCGTCAGTTCG-AAGCCCTAACCCCCGACGAGAAGCACTTCATCA 251 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | || | || || || || ||||| || || || || |||||| || || || Sbjct 250 CCCATGTCCTCGCCTTTTTCGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGGGA 191 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | |||| | ||| || || || |||||| |||||||| |||||||| | || Sbjct 190 GGTTCATGAAGGAGGTTCAAGTCGCGGAGGCGCGCGCCTTCTACGGCTTCCAGATCGGCA 131 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCG 25771 | || || | ||||| ||| |||| | |||||| | ||||||| | ||| || Sbjct 130 TTGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGTCGTACATCAAGGACTCCG 71 Query 25772 CCGAGAGAGA-TCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 |||||| ||| || || ||| |||||||| | | || || || || |||||| Sbjct 70 CCGAGA-AGACCCGCCTCTTTCACGCCATCGACACCGTCCCTTGCGTCGCGAAGAAGGCC 12 Query 25831 CGGTGGGCC 25839 | ||||||| Sbjct 11 CAGTGGGCC 3 >seq97145 Length=990 Score = 98.7 bits (108), Expect = 2e-15 Identities = 207/306 (68%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 25473 AGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGA 25532 ||| || ||||| ||||||||||| || | ||| |||||||||||| || | || Sbjct 333 AGAAATCTGGGAAATGTACAAGAAAGCCGAGGCCTCCTTCTGGACCGCCGAGGAAGTGGA 274 Query 25533 TCTGGCCAAGGACA-TGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 || || |||| | | | | | | | | || || || | |||||| |||| || ||| Sbjct 273 CCTCTCCCAGGATATTCGCCAGTTTG-AAGCCCTGACCCACGACGAGAAGCACTTCATCA 215 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 |||| | || ||||| || ||||| || || || || |||||| || || || Sbjct 214 GCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGAATCGTACTCGAGAACCTCGCCGGGA 155 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | |||| | ||| || || || |||||| |||||||| |||||||| |||| Sbjct 154 GGTTCATGAAGGAGGTTCAAGTCGCGGAGGCGCGCGCCTTCTACGGCTTCCAGATCGCCA 95 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCG 25771 |||| || | ||||| ||| |||| | |||||| | |||| || | ||| || Sbjct 94 TCGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGTCGTATATCAAGGACTCCG 35 Query 25772 CCGAGA 25777 |||||| Sbjct 34 CCGAGA 29 >seq237122 Length=485 Score = 86.0 bits (94), Expect = 1e-11 Identities = 125/169 (74%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 25875 CGAGCGGCTGGTAGCCTTTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCG 25932 |||||| ||| | ||||| || ||| || || || ||||| ||| ||| || |||| Sbjct 21 CGAGCGTCTGATCGCCTTCGCCTGC-GTCGAAGGGATCTTCTTCTCCGGAAGCTTCTGCG 79 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 |||| |||||||||||| | | | || | |||||| || || ||| ||||||||||| Sbjct 80 -CCATTTTCTGGCTCAAG-AAACGAGGCCTCATGCCGGGACTCACCTTCTCCAACGAGCT 137 Query 25992 CATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||| | ||||| ||||| ||| | || ||||| |||||||| ||| Sbjct 138 GATCTCACGAGACGAAGGTCTGCACTGCGACTTTGCTTGCCTGCTTTAC 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 924246727976000