Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq395788 87.8 3e-12 seq395693 87.8 3e-12 seq224753 86.0 1e-11 >seq395788 Length=5751 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 169725 TTAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTC 169784 || ||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||| Sbjct 122 TTGGGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTC 180 Query 169785 GAGCCCCGTCAGTCC 169799 ||||||||||||||| Sbjct 181 GAGCCCCGTCAGTCC 195 >seq395693 Length=58139 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 169725 TTAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTC 169784 || ||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||| Sbjct 57445 TTGGGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTC 57503 Query 169785 GAGCCCCGTCAGTCC 169799 ||||||||||||||| Sbjct 57504 GAGCCCCGTCAGTCC 57518 >seq224753 Length=3091 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| |||||| |||| ||||||||||| |||||| | ||||||||||| Sbjct 3004 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 3062 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 3063 CCCCGTCAGTCC 3074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 773782478590000