Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq3 500 3e-137 seq332406 136 1e-27 seq333312 113 1e-20 seq295831 102 2e-17 seq371407 98.7 3e-16 seq137405 95.1 4e-15 >seq3 Length=31233 Score = 500 bits (554), Expect = 3e-137 Identities = 703/984 (71%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || ||||| ||||| || || | ||||| || Sbjct 680 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCCATACCAAGATTA 739 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 |||||||||| || |||||||| || || || || | || | | | | | | |||| Sbjct 740 GCACGGTTAATGATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTACAGAT 799 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 || || || || |||||||| |||||||||||||| || | || | || | |||| Sbjct 800 TGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTAAAC 859 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 ||||||||||| |||||||| ||||| || ||||| || | | ||| ||||| || || Sbjct 860 CAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAAA 919 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 || |||||||||||||| | || |||||||| || ||||| || |||||||| || || Sbjct 920 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTT 979 Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830 |||||||||||||| || ||||||| | || || | | ||| || || || | Sbjct 980 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCCCTG 1039 Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890 || | || || |||| | ||| ||||||||| ||| | || || ||||| Sbjct 1040 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 1099 Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950 || || ||||| | ||||||||| || |||||||| || ||||||||||| ||||| || Sbjct 1100 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACA 1159 Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010 | |||| ||||||| || || || || || | |||||| | |||||||| || || Sbjct 1160 ATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGA 1219 Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070 |||| ||||| | | ||| |||||||| ||||| || |||||||| || || |||||| Sbjct 1220 CCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 1279 Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130 ||||| || | ||| || || || | |||||||||||||| || ||||| ||| | Sbjct 1280 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 1339 Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190 || |||| | |||||| | || | | | | ||||| || ||||| | |||| Sbjct 1340 GCTACACCAAGTAAGAAGTGTAGAACAATTAACTCATAAGGACCACCATTGTATAACCAT 1399 Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250 ||||||| | ||| |||||||| |||||||| ||||| | || || || | | Sbjct 1400 TCATCAACAGAAGCCGCTTCCCAGATTGGGTAAAAGTGCAAACCTATAGCCGCAGAAGTA 1459 Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310 |||| | ||| || || || || ||||| ||||| | || || |||| || ||||| Sbjct 1460 GGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 1519 Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTA 22370 || || ||||| || || || || || || ||| || ||||||||||| || || Sbjct 1520 CGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTT 1579 Query 22371 GCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATT 22429 |||| ||| ||| | || ||||| | || || |||||||| | ||||||||||| | Sbjct 1580 GCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTC 1638 Query 22430 AGTAGAGGTGACCCAGGAACAAAA 22453 ||| ||| | |||| ||| || Sbjct 1639 AGTGCTGGTTATCCAGTTACAGAA 1662 >seq332406 Length=435 Score = 136 bits (150), Expect = 1e-27 Identities = 197/275 (72%), Gaps = 6/275 (2%) Strand=Plus/Minus Query 21474 AGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCA 21533 ||||| | ||||||| || || || ||||| ||||| || | | ||||| || ||| Sbjct 272 AGGTCTACAGGGAAGTCATGAGCATTACGCTCGTGCATAACTTTCATACCAAGATTAGCA 213 Query 21534 CGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGG 21593 ||||||| || |||||||| || || || || | | | | | | | | | |||| Sbjct 212 CGGTTAATGATATCAGCCCAAGTATTAATTACACGAGCTTGACTATCAACTACAAATTGA 153 Query 21594 TTAAAGTTGAAACCATTCAAGTTGAAAGCCATGG---TAGACACGCCAAGCGCAGCAAAC 21650 || || || ||||||| |||||||||||||| | || | || ||||| | |||| Sbjct 152 TTGAAATTAAAACCATCTAAGTTGAAAGCCATAGCGCTA-ATACCTAAAGCG--GTAAAC 96 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 |||||||||| | |||||| ||||| || ||||| || | | | | ||||| || || Sbjct 95 AAAATACCTACTATAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAATGAGAATTGTTGAAA 36 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCC 21745 || |||||||||||||| | || |||||||| || Sbjct 35 CTTGCATATTGGAAGATCAATCGGCCAAAATAACC 1 >seq333312 Length=291 Score = 113 bits (124), Expect = 1e-20 Identities = 198/285 (69%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 21918 TGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATC 21977 |||||||| || ||||||||||| ||||| || | |||| ||||||| || || || || Sbjct 1 TGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATT 60 Query 21978 CCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCA 22037 || | |||||| | |||||||| || || | || ||||| | | ||| |||||| Sbjct 61 CCTAGAGGCATACCGTCAGAAAAGCTTCCTTGACTAATTGGATAGATCAAGAAAACAGCA 120 Query 22038 GTCGCAGCGGCGACAGGAGCAGAGTACGCA-ACAAAGATCCAGGGC---CTCAT-CCCTA 22092 || ||| | || |||||||| || ||| || || || | || | ||||| || | Sbjct 121 GTAGCAACTGCAACAGGAGCTGAATACCCAGACGAAAACTAAGTTCCCACTCATGACCCA 180 Query 22093 GTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGA 22152 | | | |||||||||||||| | ||||| ||| | || |||| | |||||| | Sbjct 181 GACAGAAACTAAGTTCCCACTCATGACCCATATAACAAGCTACACCAAGTAAGAAGTGTA 240 Query 22153 ATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCAA 22197 | | | | | ||||| || ||||| | ||||||||||| Sbjct 241 GAGCAATTAACTCATAAGGACCACCATTGTATAACCATTCATCAA 285 >seq295831 Length=1525 Score = 102 bits (112), Expect = 2e-17 Identities = 187/267 (70%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 22170 GGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGT 22229 ||||| || ||||| | ||||||||||| | ||| |||||||| |||||||| ||||| Sbjct 1509 GGACCTCCATTGTATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGGTAAAAGTGC 1450 Query 22230 AGTCCGATGGCATT--ACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACA 22287 | || || ||| | | |||| | ||| || || || || ||||| ||||| | Sbjct 1449 AAACCTAT--AATTGCAAAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAA 1392 Query 22288 ACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAA 22347 ||||| ||| || ||||| || | ||||| || || | || || || ||| | Sbjct 1391 GTAGGGATCCAAAAACAGGTTCACGAACACCATCAATATCTATCGGAGGGGCAGCAATGA 1332 Query 22348 AGGCGATAATAAA-ACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAA 22405 | ||||||||||| |||| || |||| ||| ||| | || ||||| | || | || Sbjct 1331 AAGCGATAATAAATACAA-AAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACAACAAA 1274 Query 22406 CCATCCTACATAAAGACGGTTATTAGT 22432 |||||| | |||||| |||| | ||| Sbjct 1273 CCATCCAATGTAAAGATGGTTTTCAGT 1247 >seq371407 Length=281 Score = 98.7 bits (108), Expect = 3e-16 Identities = 134/186 (72%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 22043 AGCGGCGACAGGAGCAGAGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCT 22102 ||| || |||||||| || || |||||| ||||| || | ||| ||||| ||| | || Sbjct 1 AGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCTAGACGAAAACT 60 Query 22103 AAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAG 22162 |||||||||||| || ||||| ||| | || |||| | |||||| | || | | Sbjct 61 AAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAA 120 Query 22163 TTGGAATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTA 22222 | ||||| || ||||| | ||||||||||| | | | |||||||| |||||||| Sbjct 121 CACATAAGGACCACCATTGTATAACCATTCATCAACAG-AACCGCTTCCCAGATTGGGTA 179 Query 22223 GAAGTG 22228 || || Sbjct 180 AAAATG 185 >seq137405 Length=2057 Score = 95.1 bits (104), Expect = 4e-15 Identities = 195/286 (68%), Gaps = 7/286 (2%) Strand=Plus/Minus Query 21501 CGCTCATGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTG 21560 ||||||||||| || | | | ||| |||||| |||||| || |||||||| || || Sbjct 1109 CGCTCATGCATAACTTTCATACGAAGATTGGCATGGTTAATGATATCAGCCCAAGTATTA 1050 Query 21561 ATCACCTGTCC---ATCAGCAGCTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTG 21617 || || || | || |||||| || || | || || || ||| | || ||||| Sbjct 1049 ATTACACAACCTTGACCATCAGCTA-CAAAG--TAATTGAAATTAAAATCCTTTAAGTTA 993 Query 21618 AAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCA 21677 |||||| | || | | | || | ||||| | |||||| ||| |||| ||| | Sbjct 992 AAAGCCGTAGTGCTAATATCTAAGGCGGTAAACCCAGTACCTATTACAAGCCAAGCAACT 933 Query 21678 AGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCA 21737 ||||||| || | | ||| ||||| || || | || ||||||||| | || ||| Sbjct 932 GGAAAGAAGTGTAAAGAACGAGAATTGTTGAAATTTTTATGTTGGAAGATCAATCGGCCA 873 Query 21738 AAATAGCCGTGAGCAGCAACAATATTGTAAG-TCTCTTCCTCTTGA 21782 ||||| || | ||| || |||| ||| || | | | ||||| |||| Sbjct 872 AAATAACCATAAGCGGCTACAACATTATAGGTTTTTTTCCTTTTGA 827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145520413474500